| From Publication: | Krogan N. J. et al. (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22. |
| Notes: | From the published set of core protein complex predictions. |
| Complex Size: | 24 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| RSC complex | 2.7918E-35 | 24 | 20 | 15 | 6292 |
| chromatin remodeling complex | 3.4843E-22 | 24 | 99 | 15 | 6292 |
| protein complex | 2.0166E-8 | 24 | 1137 | 17 | 6292 |
| nuclear part | 1.2913E-7 | 24 | 1103 | 16 | 6292 |
| macromolecular complex | 5.2115E-6 | 24 | 1635 | 17 | 6292 |
| SWI/SNF-type complex | 1.3604E-5 | 24 | 13 | 3 | 6292 |
| SWI/SNF complex | 1.3604E-5 | 24 | 13 | 3 | 6292 |
| nucleus | 2.2874E-5 | 24 | 2041 | 18 | 6292 |
| intracellular organelle part | 5.9532E-4 | 24 | 2282 | 17 | 6292 |
| organelle part | 5.9532E-4 | 24 | 2282 | 17 | 6292 |
| i-AAA complex | 7.6148E-3 | 24 | 2 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| chromatin remodeling | 7.4872E-25 | 24 | 68 | 15 | 6292 |
| ATP-dependent chromatin remodeling | 3.2033E-24 | 24 | 26 | 12 | 6292 |
| chromatin modification | 1.4175E-18 | 24 | 168 | 15 | 6292 |
| chromatin organization | 2.5869E-17 | 24 | 203 | 15 | 6292 |
| chromosome organization | 4.1255E-12 | 24 | 555 | 16 | 6292 |
| organelle organization | 1.7555E-8 | 24 | 1127 | 17 | 6292 |
| double-strand break repair | 1.9021E-6 | 24 | 57 | 5 | 6292 |
| cellular component organization | 3.1922E-6 | 24 | 1582 | 17 | 6292 |
| chromatin remodeling at centromere | 1.3945E-5 | 24 | 2 | 2 | 6292 |
| response to DNA damage stimulus | 1.9146E-5 | 24 | 236 | 7 | 6292 |
| cellular response to stress | 7.2237E-5 | 24 | 290 | 7 | 6292 |
| chromosome segregation | 1.0039E-4 | 24 | 128 | 5 | 6292 |
| double-strand break repair via nonhomologous end joining | 1.0617E-4 | 24 | 25 | 3 | 6292 |
| non-recombinational repair | 2.7006E-4 | 24 | 34 | 3 | 6292 |
| response to stress | 3.3856E-4 | 24 | 497 | 8 | 6292 |
| cellular response to stimulus | 3.8483E-4 | 24 | 379 | 7 | 6292 |
| DNA repair | 6.6518E-4 | 24 | 192 | 5 | 6292 |
| DNA metabolic process | 1.0181E-3 | 24 | 585 | 8 | 6292 |
| response to stimulus | 5.7203E-3 | 24 | 766 | 8 | 6292 |
| glycyl-tRNA aminoacylation | 7.6148E-3 | 24 | 2 | 1 | 6292 |
| nucleic acid metabolic process | 9.5021E-3 | 24 | 1415 | 11 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| DNA-dependent ATPase activity | 1.3823E-19 | 24 | 55 | 12 | 6292 |
| ATPase activity, coupled | 4.2248E-14 | 24 | 149 | 12 | 6292 |
| ATPase activity | 2.8148E-12 | 24 | 211 | 12 | 6292 |
| nucleoside-triphosphatase activity | 2.5654E-11 | 24 | 329 | 13 | 6292 |
| hydrolase activity, acting on acid anhydrides | 6.2527E-11 | 24 | 353 | 13 | 6292 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 6.2527E-11 | 24 | 353 | 13 | 6292 |
| pyrophosphatase activity | 6.2527E-11 | 24 | 353 | 13 | 6292 |
| hydrolase activity | 5.9785E-6 | 24 | 911 | 13 | 6292 |
| catalytic activity | 2.6436E-4 | 24 | 2150 | 17 | 6292 |
| chromatin binding | 6.8504E-3 | 24 | 33 | 2 | 6292 |
| glycine-tRNA ligase activity | 7.6148E-3 | 24 | 2 | 1 | 6292 |