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Protein Overview: NUP116

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run RPA135 his-HA tag on RPA135 Schneider, DA, et al. (2006)
View Run RPA135 his-HA tag on RPA135 Schneider, DA, et al. (2006)
View Run ASF1 3829 - low filter Green EM, et al (2005)
View Run RLF2 phosphorylation data - cascade search Green EM, et al (2005)
View Run MLP2 #29 Asynchronous Prep5-TiO2 Flowthrough Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

  BAIT PREY HITS PUBLICATION
View Screen PDI1 NUP116 1 Unpublished Fields Lab Data
View Screen FAR10 NUP116 1 Unpublished Fields Lab Data

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data NUP116 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..510] MSA 12.136996 View MSA. No confident structure predictions are available.
2 View Details [511..623] deduced N/A No confident structure predictions are available.
3 View Details [624..1006] MSA 7.152997 View MSA. No confident structure predictions are available.
4 View Details [1007..1113] deduced N/A No confident structure predictions are available.
5 View Details [683..781] MSA 2.300996 View MSA. No confident structure predictions are available.
6 View Details [782..967] deduced N/A No confident structure predictions are available.
7 View Details [968..1113] PSI-BLAST 64.154902 Multiple conformations in the ligand-binding site of the yeast nuclear pore targeting domain of NUP116P




Philius Transmembrane Prediction:

Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification: 0.80

Source: Reynolds et al. (2008)


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle