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Protein Overview: MRPL6

General Information:
Name(s) found: MRPL6 / YHR147C [SGD]
Description(s) found:
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  • gi|730589|sp|P32904.2|RM06_YEAST RecName: Full=54S ribosomal protein L6, mitochondrial; AltName: Full=YmL16; Flags: Precursor [NCBI NR]
  • gi|6321941|ref|NP_012017.1| Mitochondrial ribosomal protein of the large subunit; Mrpl6p [Saccharomyces cerevisiae] [NCBI NR]
  • pir||S46764 ribosomal protein L6 precursor, mitochondrial - yeast (Saccharomyces cerevisiae) [NCBI NR]
  • gi|500660|gb|AAB68986.1| MRPL6p: Mitochondrial ribosomal protein L6 [Saccharomyces cerevisiae] [NCBI NR]
  • 54S ribosomal protein L6, mitochondrial OS=Saccharomyces cerevisiae GN=MRPL6 PE=1 SV=2 [Swiss-Prot]
  • MRPL6 Mitochondrial ribosomal protein, large subunit [mips]
  • Mitochondrial ribosomal protein of the large subunit [SGD]
  • MRPL6, Chr VIII from 392640-393284, reverse complement [yeast_orfs2]
  • Chr VIII from 392640-393284, reverse complement [yeastorf3.fasta]
  • Chr VIII from 393284-392640, reverse complement [yeastorf5.fasta]
  • (P32904) 60S ribosomal protein L6, mitochondrial precursor (YmL6) [4932.FASTACCERV.txt]
  • MRPL6 SGDID:S0001190, Chr VIII from 393284-392640, reverse complement, Verified ORF [yeastflysequest.fasta]
  • MRPL6 SGDID:S0001190, Chr VIII from 393285-392641, reverse complement, Verified ORF [10112005cervSGD.fasta]
  • Mitochondrial ribosomal protein of the large subunit [Saccharomyces cerevisiae]gi|500660|gb|AAB68986.1| MRPL6p: Mitochondrial ribosomal protein L6 [Saccharomyces cerevisiae]gi|630042|pir||S46764 ribosomal protein L6 precursor, mitochondrial - yeast (Sa [nrdb_11152004_Chlamydomonas]
  • (P32904) 60S ribosomal protein L6, mitochondrial precursor (YmL16) (MRP-L6) [cerv4932.FASTAC]
  • MRPL6 SGDID:S000001190, Chr VIII from 393286-392642, reverse complement, Verified ORF, "Mitochondrial ribosomal protein of the large subunit" [SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta]
  • Mitochondrial ribosomal protein of the large subunit; Mrpl6p [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • 60S ribosomal protein L6, mitochondrial precursor (YmL16) (MRP-L6) [nr-271106-contam.fasta]
  • MRPL6p: Mitochondrial ribosomal protein L6 [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • [chemostatdb.fasta]
  • 54S ribosomal protein L6, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MRPL6 PE=1 SV=2 [UniProt_S_cerevisiae_20120516_05-16-2012_reversed.fasta]
  • MRPL6 SGDID:S000001190, Chr VIII from 393283-392639, Genome Release 64-1-1, reverse complement, Verified ORF, "Mitochondrial ribosomal protein of the large subunit" [yeast-030211-contam.fasta]
  • MRPL6 SGDID:S000001190, Chr VIII from 393283-392639, Genome Release 64-2-1, reverse complement, Verified ORF, "Mitochondrial ribosomal protein of the large subunit" [20141208_orf_trans.fasta]
  • YHR147C SGDID:S000001190, Chr VIII from 393283-392639, Genome Release 64-1-1, reverse complement, Verified ORF, "Mitochondrial ribosomal protein of the large subunit" [2016-01-SGD_Yeast_Contam_Riffle_20140507-Ska-Hec-110-tubulin.fasta]
    • Organism: Saccharomyces cerevisiae
    Length: 214 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDALink to PubMed article]
    mitochondrial large ribosomal subunit [IDALink to PubMed article][IPILink to PubMed article]
    Biological Process: translation [IDALink to PubMed article]
    Molecular Function: structural constituent of ribosome [IDALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFIQRRLLS QTLFLRSQVG SLPLYISPEV QVSINALSMP RIIRKGRTSM NISQNITVKG  60
   61 PKGELSVEVP DFLHLDKDEK HGKINVTVQN SEDKHQRSMW GTVRSLINNH IIGVTEGHLA 120
  121 VLRFVGTGYR AQLENDGKFV NVKVGASIKQ GLDVPEGIVV KTPAPTSLII EGCNKQQVLL 180
  181 FAAKLRKFHP PEPYKGKGIY VNDETIKLKD KKIK

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Riffle et al. (2010) (Unpublished Data) IMG1 IMG2 MHR1 MRP7 MRPL1 MRPL17 MRPL23 MRPL24 MRPL27 MRPL35 MRPL36 MRPL39 MRPL4 MRPL44 MRPL6 MRPL7
    View Details (MIPS) Mewes HW, et al. (2004) IMG1 IMG2 MNP1 MRP20 MRP49 MRP7 MRPL1 MRPL10 MRPL11 MRPL13 MRPL15 MRPL16 MRPL17 MRPL19 MRPL20 MRPL22 MRPL23 MRPL24 MRPL25 MRPL27 MRPL28 MRPL3 MRPL31 MRPL32 MRPL33 MRPL35 MRPL36 MRPL37 MRPL38 MRPL39 MRPL4 MRPL40 MRPL44 MRPL49 MRPL50 MRPL51 MRPL6 MRPL7 MRPL8 MRPL9 RML2 RTC6 YDR115W YML6
    View Details Gavin AC, et al. (2002) ADA2 ADH1 ATG26 BEM2 BUD3 COG3 COP1 CSE2 CYR1 ENO2 FAB1 FBA1 GAL11 GCN5 HRR25 IMG1 IMG2 IML1 MED1 MED11 MED2 MED4 MED6 MED7 MED8 MHR1 MLP1 MRH4 MRM1 MRP20 MRP49 MRP7 MRPL1 MRPL10 MRPL13 MRPL16 MRPL17 MRPL19 MRPL20 MRPL23 MRPL24 MRPL25 MRPL27 MRPL28 MRPL3 MRPL35 MRPL36 MRPL39 MRPL4 MRPL44 MRPL51 MRPL6 MRPL7 MRPL8 NUG1 NUT1 NUT2 PGD1 PGK1 PRP43 RET2 RGR1 ROM2 ROX3 RPG1 RPO21 RTC6 SEC1 SEC26 SEC27 SIN4 SNF2 SPT7 SRB2 SRB4 SRB5 SRB6 SRB7 SRB8 SRP1 SSE2 SSN2 SSN3 SSN8 SWI3 SYP1 TAF5 TAF6 TIF1, TIF2 UTP20 YDR115W YIL077C YML6
    View Details Qiu et al. (2008) IMG1 IMG2 MHR1 MNP1 MRP1 MRP10 MRP17 MRP2 MRP20 MRP21 MRP4 MRP49 MRP51 MRP7 MRPL1 MRPL10 MRPL11 MRPL13 MRPL15 MRPL16 MRPL17 MRPL19 MRPL20 MRPL22 MRPL23 MRPL24 MRPL25 MRPL27 MRPL28 MRPL3 MRPL31 MRPL32 MRPL33 MRPL35 MRPL36 MRPL37 MRPL38 MRPL39 MRPL4 MRPL40 MRPL44 MRPL49 MRPL50 MRPL51 MRPL6 MRPL7 MRPL8 MRPL9 MRPS12 MRPS16 MRPS17 MRPS18 MRPS28 MRPS35 MRPS5 MRPS8 MRPS9 NAM9 PET123 RML2 RSM18 RSM19 RSM25 RSM26 RSM27 RSM28 RSM7 RTC6 SWS2 VAR1 YBL029C-A YDR115W YML6 YMR31

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data MRPL6 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..117] PSI-BLAST 287.232149 50S subunit
    2 View Details [118..214] PSI-BLAST 287.232149 50S subunit

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  9.94614353072897 bayes_pls_golite062009
  • structural molecule activity
    		•  9.3691467221987 bayes_pls_golite062009
  • binding
    		•  1.17169736942297 bayes_pls_golite062009
  • protein binding
    		•  0.574304313407193 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle