| From Publication: | Gavin A.C. et al. (2006) Proteome survey reveals modularity of the yeast cell machinery. Nature. 2006 Mar 30;440(7084):631-6. Epub 2006 Jan 22. |
| Notes: | From the published set of protein complexes (core proteins only) |
| Complex Size: | 8 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| histone deacetylase complex | 2.2802E-11 | 8 | 23 | 5 | 6292 |
| chromatin remodeling complex | 4.7014E-8 | 8 | 99 | 5 | 6292 |
| nucleoplasm part | 4.3736E-6 | 8 | 245 | 5 | 6292 |
| nucleoplasm | 6.3232E-6 | 8 | 264 | 5 | 6292 |
| Sin3-type complex | 1.4121E-5 | 8 | 5 | 2 | 6292 |
| nuclear lumen | 8.8346E-5 | 8 | 453 | 5 | 6292 |
| nucleus | 1.2145E-4 | 8 | 2041 | 8 | 6292 |
| organelle lumen | 5.3463E-4 | 8 | 660 | 5 | 6292 |
| intracellular organelle lumen | 5.3463E-4 | 8 | 660 | 5 | 6292 |
| membrane-enclosed lumen | 7.0576E-4 | 8 | 700 | 5 | 6292 |
| Rpd3L complex | 1.2715E-3 | 8 | 1 | 1 | 6292 |
| Rpd3L-Expanded complex | 1.2715E-3 | 8 | 1 | 1 | 6292 |
| nuclear chromatin | 3.5536E-3 | 8 | 73 | 2 | 6292 |
| chromatin | 3.9464E-3 | 8 | 77 | 2 | 6292 |
| Sin3 complex | 5.0773E-3 | 8 | 4 | 1 | 6292 |
| nuclear part | 5.7545E-3 | 8 | 1103 | 5 | 6292 |
| protein complex | 6.5954E-3 | 8 | 1137 | 5 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| histone deacetylase activity | 1.7342E-19 | 8 | 32 | 8 | 6292 |
| protein deacetylase activity | 1.7342E-19 | 8 | 32 | 8 | 6292 |
| deacetylase activity | 3.8804E-19 | 8 | 35 | 8 | 6292 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 6.2214E-18 | 8 | 48 | 8 | 6292 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 4.7792E-16 | 8 | 80 | 8 | 6292 |
| transcription factor binding | 1.298E-7 | 8 | 43 | 4 | 6292 |
| hydrolase activity | 1.881E-7 | 8 | 911 | 8 | 6292 |
| transcription corepressor activity | 7.4989E-7 | 8 | 16 | 3 | 6292 |
| transcription cofactor activity | 1.3042E-5 | 8 | 40 | 3 | 6292 |
| transcription repressor activity | 1.7441E-5 | 8 | 44 | 3 | 6292 |
| catalytic activity | 1.8428E-4 | 8 | 2150 | 8 | 6292 |
| transcription coactivator activity | 2.9353E-4 | 8 | 21 | 2 | 6292 |
| transcription activator activity | 2.4935E-3 | 8 | 61 | 2 | 6292 |
| protein binding | 4.508E-3 | 8 | 612 | 4 | 6292 |
| transcription regulator activity | 7.087E-3 | 8 | 339 | 3 | 6292 |