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Protein Overview: HRP1

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run RPA135 No Comments Schneider, DA, et al. (2006)
View Run MLP2 #03 Alpha Factor Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #29 Asynchronous Prep5-TiO2 Flowthrough Keck JM, et al. (2011)

Yeast Two-Hybrid Data

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data HRP1 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..58] deduced N/A No confident structure predictions are available.
2 View Details [59..152] PSI-BLAST 167.39794 Poly(A)-binding protein
3 View Details [153..244] PSI-BLAST 402.9794 Nuclear ribonucleoprotein A1 (RNP A1, UP1)
4 View Details [245..347] PSI-BLAST 13.0 Polypyrimidine tract-binding protein
5 View Details [348..429] PSI-BLAST 13.0 Polypyrimidine tract-binding protein
6 View Details [430..534] deduced N/A No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • RNA binding
  • 6.73097473547076 bayes_pls_golite062009
  • mRNA binding
  • 5.29759606920196 bayes_pls_golite062009
  • nucleic acid binding
  • 4.51665560478175 bayes_pls_golite062009
  • 4.45006565905155 bayes_pls_golite062009
  • binding
  • 3.64400841800969 bayes_pls_golite062009
  • single-stranded RNA binding
  • 2.93798024346416 bayes_pls_golite062009
  • poly-pyrimidine tract binding
  • 2.79052809544187 bayes_pls_golite062009
  • structural molecule activity
  • 2.78501986457503 bayes_pls_golite062009
  • transcription regulator activity
  • 1.7776932219095 bayes_pls_golite062009
  • DNA binding
  • 1.65208390030564 bayes_pls_golite062009
  • snRNA binding
  • 1.44241647066188 bayes_pls_golite062009
  • protein binding
  • 1.12215421354121 bayes_pls_golite062009
  • mRNA 3'-UTR binding
  • 0.824614388276642 bayes_pls_golite062009
  • transcription factor activity
  • 0.795084003256395 bayes_pls_golite062009
  • translation regulator activity
  • 0.38120065819101 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 0.304235325881492 bayes_pls_golite062009
  • U1 snRNA binding
  • 0.290135317640781 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
  • 0.128616879457381 bayes_pls_golite062009
    2 No functions predicted.
    3
    Term Confidence Notes
  • RNA binding
  • 6.73097473547076 bayes_pls_golite062009
  • mRNA binding
  • 5.29759606920196 bayes_pls_golite062009
  • nucleic acid binding
  • 4.51665560478175 bayes_pls_golite062009
  • 4.45006565905155 bayes_pls_golite062009
  • binding
  • 3.64400841800969 bayes_pls_golite062009
  • single-stranded RNA binding
  • 2.93798024346416 bayes_pls_golite062009
  • poly-pyrimidine tract binding
  • 2.79052809544187 bayes_pls_golite062009
  • structural molecule activity
  • 2.78501986457503 bayes_pls_golite062009
  • transcription regulator activity
  • 1.7776932219095 bayes_pls_golite062009
  • DNA binding
  • 1.65208390030564 bayes_pls_golite062009
  • snRNA binding
  • 1.44241647066188 bayes_pls_golite062009
  • protein binding
  • 1.12215421354121 bayes_pls_golite062009
  • mRNA 3'-UTR binding
  • 0.824614388276642 bayes_pls_golite062009
  • transcription factor activity
  • 0.795084003256395 bayes_pls_golite062009
  • translation regulator activity
  • 0.38120065819101 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 0.304235325881492 bayes_pls_golite062009
  • U1 snRNA binding
  • 0.290135317640781 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
  • 0.128616879457381 bayes_pls_golite062009
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle