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Protein Overview: SPG5

General Information:
Name(s) found: SPG5 / YMR191W [SGD]
Description(s) found:
Found 16 descriptions.
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  • Protein required for survival at high temperature during stationary phase; not required for growth on nonfermentable carbon sources [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 373 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVGGNNWSM WLRMSRVHLR QITKSLDRTL ISLSHGNFSH QYNRNIFVTW WKSLFEASTA  60
   61 FRRASGLTVS PLTRRGIARF DHFRPVPNVS KFASFPRVPK GAPRGLFTNW NMTTSKRLLG 120
  121 QRAYSTSSIK FTQEAVNNMT ISLRCFFNSL GGLNQCSHSN SCKAYQNASN VTSKQDHVQP 180
  181 VALKKLSQKD INFIRNLELF KIMKTQNEVV DETSAYYMEK PGSYIEFTIS EFNVNGTFSA 240
  241 PLSFLDPSLL ADLDEMIRNY KYELKSIYSS VDMILQNYGS LPITFHRNKI RIHFPNSTVV 300
  301 ETEKLIAGLN IATGVIYADT SPDISLEGTN LNALVNVDNS GSVWSFVKEP SFPSRSAFSP 360
  361 ILSDASYDTY ELV

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Riffle et al. (2010) (Unpublished Data) CDC39 POL4 RPN1 RPN10 RPN11 RPN12 RPN13 RPN2 RPN3 RPN5 RPN6 RPN7 RPN8 RPN9 RPT1 RPT2 RPT3 RPT4 RPT5 RPT6 SEM1 SLX5 SPG5 SWA2 UBP6
    View Details Krogan NJ, et al. (2006) CSI1 CSN9 ERV46 FPR2 HUL5 IQG1 MOT1 MPT5 NAS6 NMD3 NPT1 PCI8 PEP1 PST1 PUS9 RPN1 RPN10 RPN11 RPN12 RPN13 RPN14 RPN2 RPN5 RPN6 RPN7 RPN8 RPN9 RPT1 RPT2 RPT3 RPT4 RPT5 RPT6 RRI1 RRI2 SEC18 SEM1 SKP1 SPG5 SPO77 SQT1 SWA2 TCB2 TIP41 TOD6 TOR2 TSR4 UBP6 YEN1 YKL027W YMR258C YNL022C YPR003C YPT52

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run ASF1 3912: TAP-tagged, strain background includes hpc2(delta) Green EM, et al (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..165] MSA 1.003907 View MSA. No confident structure predictions are available.
    2 View Details [166..373] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle