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Protein Overview: YKT6

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run VAM3 sample: hx1 Hao Xu, et al. (2010)
View Run VAM3 sample: hx3 Hao Xu, et al. (2010)
View Run VAM3 sample: hx4 Hao Xu, et al. (2010)
View Run VAM3 Sample: HX11 - both fusion and trans-SNARE complex formation take place. Hao Xu, et al. (2010)
View Run VAM3 Sample: HX14 - mixture in detergent (control). Hao Xu, et al. (2010)

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

  BAIT PREY HITS PUBLICATION
View Screen TDH1 YKT6 1 Unpublished Fields Lab Data

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..137] PSI-BLAST 798.68867 Synaptobrevin homolog 1 ykt6
2 View Details [138..200] PSI-BLAST 48.9897 Endobrevin

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • protein-cysteine S-acyltransferase activity
  • 5.70902768432932 bayes_pls_golite062009
  • protein-cysteine S-palmitoleyltransferase activity
  • 5.70902768432932 bayes_pls_golite062009
  • S-acyltransferase activity
  • 2.42277624456482 bayes_pls_golite062009
  • palmitoyltransferase activity
  • 2.39665981402803 bayes_pls_golite062009
  • SNAP receptor activity
  • 2.23518960752054 bayes_pls_golite062009
  • clathrin binding
  • 2.03985651011974 bayes_pls_golite062009
  • binding
  • 1.76450203501026 bayes_pls_golite062009
  • transporter activity
  • 1.71943098913274 bayes_pls_golite062009
  • substrate-specific transporter activity
  • 0.939682472116899 bayes_pls_golite062009
  • hydrolase activity
  • 0.815544630085919 bayes_pls_golite062009
  • signal recognition particle binding
  • 0.66489873553532 bayes_pls_golite062009
  • protein binding
  • 0.590936503990514 bayes_pls_golite062009
  • protein transporter activity
  • 0.17469233791907 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
  • 0.131410992694836 bayes_pls_golite062009
  • pyrophosphatase activity
  • 0.0936690070284361 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
  • 0.0846345824909659 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
  • 0.0820309452260982 bayes_pls_golite062009
    2 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle