| General Information: |
|
| Name(s) found: |
NPL4 /
YBR170C
[SGD]
|
| Description(s) found:
Found 29 descriptions. SHOW ALL |
|
| Organism: | Saccharomyces cerevisiae |
| Length: | 580 amino acids |
Gene Ontology: |
|
| Cellular Component: |
nuclear membrane-endoplasmic reticulum network
[IDA ]
endoplasmic reticulum [IDA ]
|
| Biological Process: |
ER-associated protein catabolic process
[IMP]
|
| Molecular Function: |
molecular_function
[ND]
|
| Sequence: |
|
| Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51
| | | | | |
1 MLIRFRSKNG THRVSCQEND LFGTVIEKLV GNLDPNADVD TFTVCEKPGQ GIHAVSELAD 60
61 RTVMDLGLKH GDMLILNYSD KPANEKDGVN VEIGSVGIDS KGIRQHRYGP LRIKELAVDE 120
121 ELEKEDGLIP RQKSKLCKHG DRGMCEYCSP LPPWDKEYHE KNKIKHISFH SYLKKLNENA 180
181 NKKENGSSYI SPLSEPDFRI NKRCHNGHEP WPRGICSKCQ PSAITLQQQE FRMVDHVEFQ 240
241 KSEIINEFIQ AWRYTGMQRF GYMYGSYSKY DNTPLGIKAV VEAIYEPPQH DEQDGLTMDV 300
301 EQVKNEMLQI DRQAQEMGLS RIGLIFTDLS DAGAGDGSVF CKRHKDSFFL SSLEVIMAAR 360
361 HQTRHPNVSK YSEQGFFSSK FVTCVISGNL EGEIDISSYQ VSTEAEALVT ADMISGSTFP 420
421 SMAYINDTTD ERYVPEIFYM KSNEYGITVK ENAKPAFPVD YLLVTLTHGF PNTDTETNSK 480
481 FVSSTGFPWS NRQAMGQSQD YQELKKYLFN VASSGDFNLL HEKISNFHLL LYINSLQILS 540
541 PDEWKLLIES AVKNEWEESL LKLVSSAGWQ TLVMILQESG |
| PUBLICATION | TOPOLOGY | COCOMPLEXED PROTEINS | |
| View Details | Riffle et al. (2010) (Unpublished Data) |
|
CDC48 NPL4 SHP1 UFD1 YDR049W |
| View Details | Krogan NJ, et al. (2006) |
|
BFA1 CDC48 DOA1 FBP1 MRM1 NDT80 NPL4 OTU1 RDS2 SHP1 TEM1 TUP1 UBX4 UBX5 UBX7 UFD1 UFD2 YDR049W YGL108C YJR098C YNL155W YOR342C |
| View Details | Gavin AC, et al. (2006) |
|
CDC48 NPL4 SHP1 UFD1 YDR049W |
| View Details | Gavin AC, et al. (2002) |
|
BNI1 CDC48 DOA1 MRPS28 NPL4 PDC1 RAI1 REG1 RPA135 RPA190 RPO31 SHP1 UFD1 YDR049W |
| View Details | Ho Y, et al. (2002) |
|
DSK2 HMF1 NPL4 RAD23 SHP1 TSL1 UBI4 UFD2 YDR049W |
The following runs contain data for this protein:
| BAIT | COMMENTS | PUBLICATION | |
| View Run | #32 Asynchronous Prep-No Phosphopeptide enrichment | Keck JM, et al. (2011) | |
| View Run | #29 Asynchronous Prep5-TiO2 Flowthrough | Keck JM, et al. (2011) |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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| PROTEIN(S) | PUBLICATION | |
| View Data |
|
Huh WK, et al. (2003) |
Domains predicted:
| # | Region(s) | Method | Confidence | Match Description | |
| 1 | View Details | [1..208] |  |
N/A | No confident structure predictions are available. |
| 2 | View Details | [209..580] | |
3.012923 | View MSA. No confident structure predictions are available. |
| 3 | View Details | [185..480] | |
3.24 | No description for 2og4A was found. |
| 4 | View Details | [481..580] | |
N/A | No confident structure predictions are available. |
| Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
| Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)