| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classfier did not use Gene Ontology annotations. [FDR: 0.021] [SVM Score: 0.822153948541] |
| Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| replication fork | 4.3504E-5 | 2 | 42 | 2 | 6292 |
| chromosomal part | 1.413E-3 | 2 | 237 | 2 | 6292 |
| epsilon DNA polymerase complex | 1.5888E-3 | 2 | 5 | 1 | 6292 |
| chromosome | 1.8898E-3 | 2 | 274 | 2 | 6292 |
| DNA polymerase complex | 3.1764E-3 | 2 | 10 | 1 | 6292 |
| nuclear replisome | 5.7138E-3 | 2 | 18 | 1 | 6292 |
| replisome | 5.7138E-3 | 2 | 18 | 1 | 6292 |
| nuclear replication fork | 6.3477E-3 | 2 | 20 | 1 | 6292 |
| nucleotide-excision repair complex | 6.6645E-3 | 2 | 21 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| zinc ion binding | 2.5415E-3 | 2 | 8 | 1 | 6292 |
| double-stranded DNA binding | 7.2981E-3 | 2 | 23 | 1 | 6292 |
| transition metal ion binding | 7.6148E-3 | 2 | 24 | 1 | 6292 |