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Protein Overview: mdl1

General Information:
Name(s) found: mdl1 / SPBC9B6.09c [Sanger Pombe]
Description(s) found:
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  • pir||T40790 probable permease - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|4760347|emb|CAB42370.1| mitochondrial peptide-transporting ATPase [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19112543|ref|NP_595751.1| mitochondrial peptide-transporting ATPase [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • gi|15214398|sp|Q9Y7M7.1|YNT9_SCHPO RecName: Full=Uncharacterized ABC transporter ATP-binding protein/permease C9B6.09c [NCBI NR]
  • mitochondrial peptide-transporting ATPase [Sanger Pombe]
  • Uncharacterized ABC transporter ATP-binding protein/permease C9B6.09c OS=Schizosaccharomyces pombe GN=SPBC9B6.09c PE=2 SV=1 [Swiss-Prot]
  • TRANSPORT ATP BINDING PROTEIN: ;N0ACC; [pompepVF.fasta]
  • Probable ATP-dependent permease C9B6.09c [pompep4896]
  • |||transport ATP binding protein [pompepnew.fasta]
  • |||transport ATP binding protein|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • putative permease [Schizosaccharomyces pombe]gi|4760347|emb|CAB42370.1| SPBC9B6.09c [Schizosaccharomyces pombe]gi|15214398|sp|Q9Y7M7|YNT9_SCHPO Probable ATP-dependent permease C9B6.09cgi|7492792|pir||T40790 probable permease - fission yeast (Schizosacc [nrdb_11152004_Chlamydomonas]
  • |||mitochondrial peptide-transporting ATPase|Schizosaccharomyces pombe|chr 2|||Manual [pompep2242005.fasta]
  • (Q9Y7M7) Probable ATP-dependent permease C9B6.09c [pompep4896_normal_reversed]
  • |mdl1||mitochondrial peptide-transporting ATPase|Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPBC9B6.09c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPBC9B6.09c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
    • Organism: Schizosaccharomyces pombe
    Length: 726 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDALink to PubMed articleLink to PubMed article]
    integral to membrane [IEA]
    mitochondrial inner membrane [ISSLink to PubMed article]
    Biological Process: oligopeptide transport [ISSLink to PubMed article]
    transmembrane transport [IEA]
    mitochondrial transport [ISSLink to PubMed article]
    Molecular Function: ATP binding [ICLink to PubMed article]
    peptide-transporting ATPase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPIRFGLSR VPFAHCYNKR VIFRANYLVP LTWLKNNVAY KSTNTLLLPT PNAEYYSTSK  60
   61 LSSQVNVSLN SLSQKASSGS KIYPFKNSFP LPFSRSILPI RSLAFLKLCV RHNSTVPSKD 120
  121 EQAQDISKIN TNGTLQTPNK KVNVFRLFTL ARGQGWNFFI AGSLLLVSSG VTMSIPYIVG 180
  181 KILDAGSSGD SSVTHIMGIP SGTFYIGLLG LFFLGSACNF GRIITLRLLS ERIVSRLRAR 240
  241 LFAKCMSLDG AFFDFHKHGD LISRLTTDSS IVGKSLSMYL SDGLRSSVSA IAGIGMMLYV 300
  301 SMRLTGYMSL IVPPIALGAF FYGEYVRKLS RTTQDALGDL TRVSEEKLAN VRTTQAFLGE 360
  361 RQEVNRYNDY IRNLFVLAKR EAFASGIFFG STGFLGNATV IAILALGGRM VAAGDITVGQ 420
  421 LSSFLLYTVY AGGSIVGLSG CFTDIMKGLG AASRLFELLD AKPKIAPTVG IPVPVTVGKA 480
  481 ILSFRNVGFA YPTRPSASIF DNLSFDIHPG TNVAIVAPSG GGKSTISQLL LRFYAPSSGK 540
  541 ILADGVDIST YNVHQWRSHF GLVGQEPVLF SGTIGENIAY GKSNASQEEI EDAAKRANCS 600
  601 FVLSFPEKWS TQVGTRGLQL SGGQKQRIAI ARALLRNPAF LILDEATSAL DGEAEVMVDK 660
  661 TIQSLMHNRS MTTITIAHKL ATIRRADQII VVGDGKVLEQ GSFERLSRPG TNFYKLMRWQ 720
  721 LGKVEP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..140] deduced N/A No confident structure predictions are available.
    2 View Details [141..726] PSI-BLAST 133.0 No description for 2hydA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • lipid transporter activity
    		•  7.47642599298853 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of substances
    		•  5.57844095962502 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
    		•  5.57813579764186 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
    		•  5.57813579764186 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
    		•  5.5689620139321 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  5.55992639965745 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  5.50005167063544 bayes_pls_golite062009
  • ATPase activity, coupled
    		•  4.98276715440477 bayes_pls_golite062009
  • heme transporter activity
    		•  4.82479229680991 bayes_pls_golite062009
  • peptide transporter activity
    		•  4.7442815698413 bayes_pls_golite062009
  • anion transmembrane-transporting ATPase activity
    		•  4.71935767060308 bayes_pls_golite062009
  • ATPase activity
    		•  4.69795387297193 bayes_pls_golite062009
  • peptide-transporting ATPase activity
    		•  4.63590351019108 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  4.45923622153365 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  4.39781350157199 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  4.38133275795019 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  4.38085303582726 bayes_pls_golite062009
  • cofactor transporter activity
    		•  4.34709589308604 bayes_pls_golite062009
  • oligopeptide-transporting ATPase activity
    		•  4.09365342567844 bayes_pls_golite062009
  • transporter activity
    		•  3.71239480053329 bayes_pls_golite062009
  • ATP binding
    		•  3.62300973398915 bayes_pls_golite062009
  • hydrogen ion transporting ATP synthase activity, rotational mechanism
    		•  3.57926427233638 bayes_pls_golite062009
  • adenyl ribonucleotide binding
    		•  3.56796420118589 bayes_pls_golite062009
  • adenyl nucleotide binding
    		•  3.50845581803587 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  3.35436118751376 bayes_pls_golite062009
  • phosphate transmembrane-transporting ATPase activity
    		•  3.20894563245332 bayes_pls_golite062009
  • inorganic anion transmembrane transporter activity
    		•  3.16975154423199 bayes_pls_golite062009
  • hydrolase activity
    		•  3.14498892233323 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.13960906549884 bayes_pls_golite062009
  • anion transmembrane transporter activity
    		•  3.13913638619234 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.1318898376276 bayes_pls_golite062009
  • ribonucleotide binding
    		•  3.09294049852753 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  3.09132855853944 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  3.08390071341252 bayes_pls_golite062009
  • iron ion transmembrane transporter activity
    		•  3.05511942104215 bayes_pls_golite062009
  • purine nucleotide binding
    		•  3.03820055021242 bayes_pls_golite062009
  • nucleotide binding
    		•  3.0109684031543 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  3.00745742755195 bayes_pls_golite062009
  • drug transmembrane transporter activity
    		•  2.97119034312001 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  2.88476360771975 bayes_pls_golite062009
  • amine-transporting ATPase activity
    		•  2.69529191205818 bayes_pls_golite062009
  • organic acid transmembrane transporter activity
    		•  2.67957846350199 bayes_pls_golite062009
  • carboxylic acid transmembrane transporter activity
    		•  2.67815672695824 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  2.61311581579476 bayes_pls_golite062009
  • sterol transporter activity
    		•  2.48473697371886 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  2.40292717311506 bayes_pls_golite062009
  • amine transmembrane transporter activity
    		•  2.29486577878686 bayes_pls_golite062009
    		• 2.20174656498665 bayes_pls_golite062009
  • vitamin transporter activity
    		•  2.1653565229854 bayes_pls_golite062009
  • phosphate transmembrane transporter activity
    		•  2.15147988861177 bayes_pls_golite062009
  • oligopeptide transporter activity
    		•  2.05580564974083 bayes_pls_golite062009
  • L-aspartate transmembrane transporter activity
    		•  2.05274761921715 bayes_pls_golite062009
  • binding
    		•  1.84115074893083 bayes_pls_golite062009
  • transition metal ion transmembrane transporter activity
    		•  1.82177108193332 bayes_pls_golite062009
  • amino acid transmembrane transporter activity
    		•  1.59627719545436 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  1.58971273330352 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.52921795164482 bayes_pls_golite062009
  • protein transporter activity
    		•  1.39215697820305 bayes_pls_golite062009
  • cation channel activity
    		•  1.33585529285301 bayes_pls_golite062009
  • molybdate ion transmembrane transporter activity
    		•  1.28313088935613 bayes_pls_golite062009
  • molybdate transmembrane-transporting ATPase activity
    		•  1.28313088935613 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of ions
    		•  1.23799860254751 bayes_pls_golite062009
  • DNA binding
    		•  1.19966224604123 bayes_pls_golite062009
  • potassium channel activity
    		•  1.17288958041707 bayes_pls_golite062009
  • sulfate transmembrane-transporting ATPase activity
    		•  1.1220946941463 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.09075553688438 bayes_pls_golite062009
  • dipeptide transporter activity
    		•  1.01130176523309 bayes_pls_golite062009
  • voltage-gated cation channel activity
    		•  1.00384984515681 bayes_pls_golite062009
  • thiamin transmembrane transporter activity
    		•  0.933872128802939 bayes_pls_golite062009
  • voltage-gated ion channel activity
    		•  0.889208591820696 bayes_pls_golite062009
  • motor activity
    		•  0.87979065815418 bayes_pls_golite062009
  • voltage-gated channel activity
    		•  0.871525745291603 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  0.860102064846772 bayes_pls_golite062009
  • ion channel activity
    		•  0.848261056209476 bayes_pls_golite062009
  • GTPase activity
    		•  0.83849854735032 bayes_pls_golite062009
  • channel activity
    		•  0.806331380134838 bayes_pls_golite062009
  • passive transmembrane transporter activity
    		•  0.806331380134838 bayes_pls_golite062009
  • substrate-specific channel activity
    		•  0.799997700906738 bayes_pls_golite062009
  • copper ion transmembrane transporter activity
    		•  0.798934081014025 bayes_pls_golite062009
  • di-, tri-valent inorganic cation transmembrane transporter activity
    		•  0.767424210804186 bayes_pls_golite062009
  • gated channel activity
    		•  0.650050847753837 bayes_pls_golite062009
  • cholesterol transporter activity
    		•  0.644421039250979 bayes_pls_golite062009
  • branched-chain aliphatic amino acid transmembrane transporter activity
    		•  0.442220326523999 bayes_pls_golite062009
  • ligase activity
    		•  0.417681194526243 bayes_pls_golite062009
  • guanyl nucleotide binding
    		•  0.399434758448606 bayes_pls_golite062009
  • GTP binding
    		•  0.398333597279278 bayes_pls_golite062009
  • guanyl ribonucleotide binding
    		•  0.39332178627529 bayes_pls_golite062009
  • catalytic activity
    		•  0.368034275052766 bayes_pls_golite062009
  • kinase activity
    		•  0.300431561463583 bayes_pls_golite062009
  • translation regulator activity
    		•  0.29096092258568 bayes_pls_golite062009
  • signal transducer activity
    		•  0.286367085584159 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.286367085584159 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
    		•  0.274994961137851 bayes_pls_golite062009
  • neutral amino acid transmembrane transporter activity
    		•  0.227570438294493 bayes_pls_golite062009
  • protein kinase activity
    		•  0.194459978373898 bayes_pls_golite062009
  • protein binding
    		•  0.170837278876362 bayes_pls_golite062009
  • protein transmembrane transporter activity
    		•  0.16843768852312 bayes_pls_golite062009
  • amino acid-transporting ATPase activity
    		•  0.147644650870465 bayes_pls_golite062009
  • structural molecule activity
    		•  0.11239762372728 bayes_pls_golite062009
  • sulfate transmembrane transporter activity
    		•  0.104477131120205 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.0689844878028699 bayes_pls_golite062009
  • transcription factor activity
    		•  0.0612932659603008 bayes_pls_golite062009
  • cation-transporting ATPase activity
    		•  0.0536898657672154 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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