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Protein Overview: YSP1

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run CHL4 No Comments Cheeseman IM, et al. (2002)
View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)
View Run RPA135 No Comments Schneider, DA, et al. (2006)
View Run MLP2 #24 Asynchronous Prep3-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)

Yeast Two-Hybrid Data

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data YSP1 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..113] MSA 4.06599 View MSA. No confident structure predictions are available.
2 View Details [114..189] PSI-BLAST 14.0 Exchange factor ARNO
3 View Details [190..296] PSI-BLAST 14.0 Exchange factor ARNO
4 View Details [297..467] PSI-BLAST 18.0 Tapp1
5 View Details [468..571] PSI-BLAST 2.39794 Pyk2-associated protein beta; Pyk2-associated protein beta ARF-GAP domain
6 View Details [572..1228] deduced N/A No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • protein binding
  • 3.17213698546013 bayes_pls_golite062009
  • binding
  • 2.86147407357315 bayes_pls_golite062009
  • transcription regulator activity
  • 1.50756932992573 bayes_pls_golite062009
  • nucleic acid binding
  • 1.2749362891779 bayes_pls_golite062009
  • DNA binding
  • 1.18878662922624 bayes_pls_golite062009
  • protein domain specific binding
  • 0.236765394237244 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 0.198922924806251 bayes_pls_golite062009
    2
    Term Confidence Notes
  • transcription regulator activity
  • 4.95502209146398 bayes_pls_golite062009
  • DNA binding
  • 4.49877554292304 bayes_pls_golite062009
  • nucleic acid binding
  • 4.4138116788102 bayes_pls_golite062009
  • transcription factor activity
  • 3.78905634607011 bayes_pls_golite062009
  • transcription activator activity
  • 3.19708783401986 bayes_pls_golite062009
  • binding
  • 3.09940998297931 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 3.07549097279613 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 2.10135825467854 bayes_pls_golite062009
  • protein binding
  • 1.80415286835431 bayes_pls_golite062009
  • transcription repressor activity
  • 1.72704408652215 bayes_pls_golite062009
  • transcription factor binding
  • 0.35726633913804 bayes_pls_golite062009
  • specific RNA polymerase II transcription factor activity
  • 0.18158516638045 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.




    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle