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Protein Overview: SET1

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)
View Run MLP2 #25 Asynchronous Prep3-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #03 Alpha Factor Prep1-TiO2 Flowthrough Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

  BAIT PREY HITS PUBLICATION
View Screen VPS5 SET1 2 Unpublished Fields Lab Data

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data SET1 Huh WK, et al. (2003)
View Data SET1 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..286] deduced N/A No confident structure predictions are available.
2 View Details [287..807] MSA 22.272997 View MSA. No confident structure predictions are available.
3 View Details [808..901] deduced N/A No confident structure predictions are available.
4 View Details [902..1080] Pfam 62.69897 SET domain No confident structure predictions are available.
5 View Details [734..809] deduced N/A No confident structure predictions are available.
6 View Details [810..1080] PSI-BLAST 61.69897 No description for 2r3aA was found.

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2 No functions predicted.
3
Term Confidence Notes
  • nucleic acid binding
  • 4.65259034341669 bayes_pls_golite062009
  • binding
  • 3.48033873254013 bayes_pls_golite062009
  • RNA binding
  • 2.51560202858525 bayes_pls_golite062009
  • telomeric DNA binding
  • 2.47873883381637 bayes_pls_golite062009
  • transcription regulator activity
  • 2.2045206027152 bayes_pls_golite062009
  • DNA binding
  • 1.99030664201171 bayes_pls_golite062009
  • mRNA binding
  • 1.52376515340629 bayes_pls_golite062009
  • transcription repressor activity
  • 1.26023364760328 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
  • 1.19033433766236 bayes_pls_golite062009
  • transcription factor activity
  • 1.09958329302628 bayes_pls_golite062009
  • protein binding
  • 1.05805521997665 bayes_pls_golite062009
  • structure-specific DNA binding
  • 0.866729044067453 bayes_pls_golite062009
  • single-stranded DNA binding
  • 0.715114913338408 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 0.633093884585572 bayes_pls_golite062009
  • 0.612296958107081 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 0.327072171076297 bayes_pls_golite062009
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle