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Protein Overview: MRPL7

General Information:
Name(s) found: MRPL7 / YDR237W [SGD]
Description(s) found:
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  • gi|817823|emb|CAA89723.1| unknown [Saccharomyces cerevisiae] [NCBI NR]
  • gi|6320443|ref|NP_010523.1| Mitochondrial ribosomal protein of the large subunit; Mrpl7p [Saccharomyces cerevisiae] [NCBI NR]
  • gi|1710597|sp|P36519.2|RM07_YEAST RecName: Full=54S ribosomal protein L7, mitochondrial; AltName: Full=YmL7; AltName: Full=YmL5; Flags: Precursor [NCBI NR]
  • pir||S54533 ribosomal protein L5 precursor, mitochondrial - yeast (Saccharomyces cerevisiae) [NCBI NR]
  • 54S ribosomal protein L7, mitochondrial OS=Saccharomyces cerevisiae GN=MRPL7 PE=1 SV=2 [Swiss-Prot]
  • MRPL7 Mitochondrial ribosomal protein, large subunit [mips]
  • Mitochondrial ribosomal protein of the large subunit [SGD]
  • MRPL7, Chr IV from 936606-937484 [yeast_orfs2]
  • Chr IV from 936606-937484 [yeastorf3.fasta]
  • (P36519) 60S ribosomal protein L7, mitochondrial precursor (YmL7) [4932.FASTACCERV.txt]
  • MRPL7 SGDID:S0002645, Chr IV from 936607-937485, Verified ORF [yeastflysequest.fasta]
  • MRPL7 SGDID:S0002645, Chr IV from 936609-937487, Verified ORF [10112005cervSGD.fasta]
  • Mitochondrial ribosomal protein of the large subunit [Saccharomyces cerevisiae]gi|817823|emb|CAA89723.1| unknown [Saccharomyces cerevisiae]gi|1078496|pir||S54533 ribosomal protein L5 precursor, mitochondrial - yeast (Saccharomyces cerevisiae)gi|171059 [nrdb_11152004_Chlamydomonas]
  • MRPL7 SGDID:S000002645, Chr IV from 936609-937487, Verified ORF, "Mitochondrial ribosomal protein of the large subunit" [SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta]
  • MRPL7 SGDID:S000002645, Chr IV from 936611-937489, Verified ORF, "Mitochondrial ribosomal protein of the large subunit" [yeast-contam.fasta]
  • MRPL7 SGDID:S000002645, Chr IV from 936612-937490, Verified ORF, "Mitochondrial ribosomal protein of the large subunit" [SGD_S-cerevisiae_na_08-19-2008_con_reversed.fasta]
  • unknown [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • Mitochondrial ribosomal protein of the large subunit; Mrpl7p [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • 60S ribosomal protein L7, mitochondrial precursor (YmL7) [nr-271106-contam.fasta]
  • [chemostatdb.fasta]
  • 54S ribosomal protein L7, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MRPL7 PE=1 SV=2 [UniProt_S_cerevisiae_20120516_05-16-2012_reversed.fasta]
  • MRPL7 SGDID:S000002645, Chr IV from 936615-937493, Genome Release 64-1-1, Verified ORF, "Mitochondrial ribosomal protein of the large subunit" [yeast-030211-contam.fasta]
  • MRPL7 SGDID:S000002645, Chr IV from 936615-937493, Genome Release 64-2-1, Verified ORF, "Mitochondrial ribosomal protein of the large subunit; MRPL7 produces both YmL5 and YmL7, which are two different modified forms of the same protein" [20141208_orf_trans.fasta]
  • TR7277|c0_g1_i1|g.5092 ORF TR7277|c0_g1_i1|g.5092 TR7277|c0_g1_i1|m.5092 type:complete len:293 (+) TR7277|c0_g1_i1:156-1034(+) [Y12_S_cerevisiae-Sep2015-contam.fasta]
  • YDR237W SGDID:S000002645, Chr IV from 936615-937493, Genome Release 64-1-1, Verified ORF, "Mitochondrial ribosomal protein of the large subunit" [2016-01-SGD_Yeast_Contam_Riffle_20140507-Ska-Hec-110-tubulin.fasta]
  • asmbl_980|g.840 ORF asmbl_980|g.840 asmbl_980|m.840 type:complete len:293 (+) asmbl_980:143-1021(+) [Y12_Trinity_v2_2_0_PASA_6May2016-contam.fasta]
  • ID=asmbl_984|g.464 ORF ID=asmbl_984|g.464 ID=asmbl_984|m.464 type:complete len:293 (+) ID=asmbl_984:143-1021(+) [Y12_quiver_Trinity_v2_2_0_PASA_2June2016-contam.fasta]
    • Organism: Saccharomyces cerevisiae
    Length: 292 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDALink to PubMed article]
    mitochondrial large ribosomal subunit [IDALink to PubMed article]
    Biological Process: translation [IDALink to PubMed article]
    Molecular Function: structural constituent of ribosome [IDALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRFSLVTHR SFSHSCVKPK SACSLVKPVH HLVKIDKSKL SPRFPELKYD KSDIRSPGFK  60
   61 PKDTHADRLN DHYLNTLQSD LLLINYSHNA AVVKGLKQRA WSGDSPYHLN RPPKNPRGSK 120
  121 AQLPDIHPIK WSNIPGLESV VINCFVREAR ENQLLAITAA LQLQQITGCK PHPIFSKNDV 180
  181 PTWKLRKGHQ MGAKVELKGK EMSQFLSTLT EIVLPRIREY KGISNQSGNR FGGISFGLTA 240
  241 EDIKFFPEID ANQDSWPKTF GMHININTSA QLDYQARTLL SGFQFPFFGE EK

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Riffle et al. (2010) (Unpublished Data) IMG1 IMG2 MHR1 MRP20 MRP49 MRP7 MRPL1 MRPL10 MRPL13 MRPL16 MRPL17 MRPL20 MRPL23 MRPL24 MRPL27 MRPL28 MRPL3 MRPL35 MRPL36 MRPL39 MRPL4 MRPL44 MRPL51 MRPL6 MRPL7 MRPL8 RTC6 UTP20 YML6
    View Details (MIPS) Mewes HW, et al. (2004) IMG1 IMG2 MNP1 MRP20 MRP49 MRP7 MRPL1 MRPL10 MRPL11 MRPL13 MRPL15 MRPL16 MRPL17 MRPL19 MRPL20 MRPL22 MRPL23 MRPL24 MRPL25 MRPL27 MRPL28 MRPL3 MRPL31 MRPL32 MRPL33 MRPL35 MRPL36 MRPL37 MRPL38 MRPL39 MRPL4 MRPL40 MRPL44 MRPL49 MRPL50 MRPL51 MRPL6 MRPL7 MRPL8 MRPL9 RML2 RTC6 YDR115W YML6
    View Details Krogan NJ, et al. (2006) MRP7 MRPL17 MRPL28 MRPL32 MRPL35 MRPL7
    View Details Gavin AC, et al. (2002) ATG26 BEM2 BUD3 COP1 CYR1 HRR25 IMG1 IMG2 IML1 MHR1 MRH4 MRM1 MRP20 MRP49 MRP7 MRPL1 MRPL10 MRPL13 MRPL16 MRPL17 MRPL19 MRPL20 MRPL23 MRPL24 MRPL25 MRPL27 MRPL28 MRPL3 MRPL35 MRPL36 MRPL39 MRPL4 MRPL44 MRPL51 MRPL6 MRPL7 MRPL8 NUG1 PRP43 RET2 ROM2 RTC6 SEC1 SEC26 SEC27 SIN4 SNF2 SWI3 SYP1 TAF5 UTP20 YDR115W YML6
    View Details Qiu et al. (2008) IMG1 IMG2 MHR1 MNP1 MRP1 MRP10 MRP17 MRP2 MRP20 MRP21 MRP4 MRP49 MRP51 MRP7 MRPL1 MRPL10 MRPL11 MRPL13 MRPL15 MRPL16 MRPL17 MRPL19 MRPL20 MRPL22 MRPL23 MRPL24 MRPL25 MRPL27 MRPL28 MRPL3 MRPL31 MRPL32 MRPL33 MRPL35 MRPL36 MRPL37 MRPL38 MRPL39 MRPL4 MRPL40 MRPL44 MRPL49 MRPL50 MRPL51 MRPL6 MRPL7 MRPL8 MRPL9 MRPS12 MRPS16 MRPS17 MRPS18 MRPS28 MRPS8 MRPS9 PET123 RML2 RSM10 RSM18 RSM19 RSM24 RSM25 RSM26 RSM27 RSM7 RTC6 VAR1 YDR115W YML6

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run ZDS1 Sample 2- cpn2 from june 2005 McCusker D, et al (2007)
    View Run BOI1 Sample boi1 with gst from october 2005 McCusker D, et al (2007)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..102] deduced N/A No confident structure predictions are available.
    2 View Details [103..292] PSI-BLAST 264.626727 Ribosomal protein L5

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • structural constituent of ribosome
    		•  10.0077098174023 bayes_pls_golite062009
  • structural molecule activity
    		•  9.43117206427219 bayes_pls_golite062009
  • binding
    		•  1.22985833191636 bayes_pls_golite062009
  • protein binding
    		•  0.551360246680731 bayes_pls_golite062009


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle