| Protein: | AB6G_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 727 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AB6G_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
504.0 | [0..34] | [727..819] |
|
Region A: Residues: [1-93] |
1 11 21 31 41 51
| | | | | |
1 MSRVVAADDN MALPFFSPEF GNVSGASSSP TTFAQLLQNV DDSTRRSHHQ HHVDVDLASP 60
61 DQSVPFVLSF TDLTYSVKVR RKFTWRRSVS SDP
|
| Detection Method: |  |
| Confidence: | 60.39794 |
| Match: | 2hydA |
| Description: | No description for 2hydA was found. |
|
Region A: Residues: [94-459] |
1 11 21 31 41 51
| | | | | |
1 GAPSEGIFSS KTKTLLNGIT GEARDGEILA VLGASGSGKS TLIDALANRI AKGSLKGNVT 60
61 LNGEVLNSKM QKAISAYVMQ DDLLFPMLTV EETLMFAAEF RLPRSLSKSK KSLRVQALID 120
121 QLGLRNAANT VIGDEGHRGI SGGERRRVSI GIDIIHDPIL LFLDEPTSGL DSTSALSVIK 180
181 VLKRIAQSGS MVIMTLHQPS YRLLRLLDRL LFLSRGQTVF SGSPAMLPRF FAEFGHPIPE 240
241 HENRTEFALD LIRELEGSAG GTRSLVEFNK GFRQRKAEPR SQTGLSLKEA ISASISKGKL 300
301 VSGATTTTHS SGSSPVSTIP TFANPFWVEL AVLAKRSMTN SRRQPELFGI RLGAVLVTGF 360
361 ILATMF
|
| Detection Method: | |
| Confidence: | 70.09691 |
| Match: | 1q1bA |
| Description: | Crystal structure of E. coli MalK in the nucleotide-free form |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 6.58863529263644 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 6.58067278719409 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of substances | 6.57974651657836 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 6.57922174989907 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 6.57807080367604 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 6.48406410175216 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 6.48154954364331 | bayes_pls_golite062009 |
| pyrophosphatase activity | 6.40467109535527 | bayes_pls_golite062009 |
| ATPase activity, coupled | 6.40151534181487 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 6.38373914253885 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 6.38247436082206 | bayes_pls_golite062009 |
| ATPase activity | 6.30019941712404 | bayes_pls_golite062009 |
| hydrolase activity | 5.13885856289543 | bayes_pls_golite062009 |
| sterol transporter activity | 4.45355165759136 | bayes_pls_golite062009 |
| anion transmembrane-transporting ATPase activity | 4.44979714930206 | bayes_pls_golite062009 |
| inorganic anion transmembrane transporter activity | 4.35344629015015 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.4837867129694 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 3.40690615950081 | bayes_pls_golite062009 |
| ribonucleotide binding | 3.40594996232845 | bayes_pls_golite062009 |
| purine nucleotide binding | 3.3669118613715 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 3.35436118751376 | bayes_pls_golite062009 |
| nucleotide binding | 3.33248266870364 | bayes_pls_golite062009 |
| ATP binding | 3.17398570826788 | bayes_pls_golite062009 |
| lipid transporter activity | 3.14635082108971 | bayes_pls_golite062009 |
| anion transmembrane transporter activity | 3.13913638619234 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 3.12628113185041 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 3.0710107594224 | bayes_pls_golite062009 |
| drug transmembrane transporter activity | 2.97119034312001 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.95886887664984 | bayes_pls_golite062009 |
| cholesterol transporter activity | 2.72457626066894 | bayes_pls_golite062009 |
| amine-transporting ATPase activity | 2.69529191205818 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 2.67957846350199 | bayes_pls_golite062009 |
| carboxylic acid transmembrane transporter activity | 2.67815672695824 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 2.64602366587529 | bayes_pls_golite062009 |
| transcription regulator activity | 2.32253394491642 | bayes_pls_golite062009 |
| amine transmembrane transporter activity | 2.29486577878686 | bayes_pls_golite062009 |
| 2.20174656498665 | bayes_pls_golite062009 | |
| eye pigment precursor transporter activity | 2.19742277986318 | bayes_pls_golite062009 |
| inorganic cation transmembrane transporter activity | 2.07980288652596 | bayes_pls_golite062009 |
| DNA binding | 1.998202240501 | bayes_pls_golite062009 |
| transporter activity | 1.9862037182943 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 1.91923955279506 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.91091452720653 | bayes_pls_golite062009 |
| hydrogen ion transporting ATP synthase activity, rotational mechanism | 1.8975283862071 | bayes_pls_golite062009 |
| molybdate transmembrane-transporting ATPase activity | 1.86846760797799 | bayes_pls_golite062009 |
| molybdate ion transmembrane transporter activity | 1.86846760797799 | bayes_pls_golite062009 |
| phosphate transmembrane-transporting ATPase activity | 1.85247645478102 | bayes_pls_golite062009 |
| organic anion transmembrane transporter activity | 1.76999970080179 | bayes_pls_golite062009 |
| nucleic acid binding | 1.75861394475305 | bayes_pls_golite062009 |
| phosphate transmembrane transporter activity | 1.66974470564566 | bayes_pls_golite062009 |
| binding | 1.64221234725269 | bayes_pls_golite062009 |
| transcription factor activity | 1.62603723026304 | bayes_pls_golite062009 |
| amino acid transmembrane transporter activity | 1.59627719545436 | bayes_pls_golite062009 |
| phosphonate transmembrane transporter activity | 1.40269234722336 | bayes_pls_golite062009 |
| peptide-transporting ATPase activity | 1.37783759788533 | bayes_pls_golite062009 |
| monovalent inorganic cation transmembrane transporter activity | 1.35377629411756 | bayes_pls_golite062009 |
| sterol-transporting ATPase activity | 1.30536878174919 | bayes_pls_golite062009 |
| glycoprotein transporter activity | 1.30536878174919 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of ions | 1.23799860254751 | bayes_pls_golite062009 |
| protein binding | 1.22129154759482 | bayes_pls_golite062009 |
| hydrogen ion transmembrane transporter activity | 1.20966904268219 | bayes_pls_golite062009 |
| peptide transporter activity | 1.19353064661766 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| sulfate transmembrane-transporting ATPase activity | 0.955327639402151 | bayes_pls_golite062009 |
| motor activity | 0.87979065815418 | bayes_pls_golite062009 |
| ion channel activity | 0.848261056209476 | bayes_pls_golite062009 |
| GTPase activity | 0.83849854735032 | bayes_pls_golite062009 |
| channel activity | 0.806331380134838 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 0.806331380134838 | bayes_pls_golite062009 |
| substrate-specific channel activity | 0.799997700906738 | bayes_pls_golite062009 |
| cation channel activity | 0.773954312814832 | bayes_pls_golite062009 |
| phospholipid transporter activity | 0.755445322666929 | bayes_pls_golite062009 |
| gated channel activity | 0.650050847753837 | bayes_pls_golite062009 |
| guanyl nucleotide binding | 0.640772201693186 | bayes_pls_golite062009 |
| guanyl ribonucleotide binding | 0.63468044350616 | bayes_pls_golite062009 |
| GTP binding | 0.621689261700018 | bayes_pls_golite062009 |
| potassium channel activity | 0.556075689670629 | bayes_pls_golite062009 |
| molybdenum ion binding | 0.52244052788317 | bayes_pls_golite062009 |
| protein transporter activity | 0.498432226280822 | bayes_pls_golite062009 |
| branched-chain aliphatic amino acid transmembrane transporter activity | 0.442220326523999 | bayes_pls_golite062009 |
| voltage-gated cation channel activity | 0.349300227226736 | bayes_pls_golite062009 |
| voltage-gated ion channel activity | 0.349274144906855 | bayes_pls_golite062009 |
| voltage-gated channel activity | 0.331606012320963 | bayes_pls_golite062009 |
| iron ion transmembrane transporter activity | 0.314034810547719 | bayes_pls_golite062009 |
| apolipoprotein A-I binding | 0.310540417068989 | bayes_pls_golite062009 |
| apolipoprotein A-I receptor activity | 0.310540417068989 | bayes_pls_golite062009 |
| syntaxin-13 binding | 0.310540417068989 | bayes_pls_golite062009 |
| apolipoprotein receptor activity | 0.310540417068989 | bayes_pls_golite062009 |
| signal transducer activity | 0.286367085584159 | bayes_pls_golite062009 |
| molecular transducer activity | 0.286367085584159 | bayes_pls_golite062009 |
| G-protein coupled receptor activity | 0.169034229773346 | bayes_pls_golite062009 |
| amino acid-transporting ATPase activity | 0.147644650870465 | bayes_pls_golite062009 |
| vitamin transporter activity | 0.146329141340657 | bayes_pls_golite062009 |
| transcription activator activity | 0.0291047953833683 | bayes_pls_golite062009 |
|
Region A: Residues: [460-649] |
1 11 21 31 41 51
| | | | | |
1 WQLDNSPKGV QERLGCFAFA MSTTFYTCAD ALPVFLQERF IFMRETAYNA YRRSSYVLSH 60
61 SLVALPSLII LSLAFAAITF WGVGLDGGLM GFLFYFLVIL ASFWAGSSFV TFLSGVVPHV 120
121 MLGYTIVVAI LAYFLLFSGF FINRDRIPGY WIWFHYISLV KYPYEAVLLN EFGDPTKCFV 180
181 RGVQIFDNTP
|
| Detection Method: | |
| Confidence: | 27.721246 |
| Match: | PF01061.15 |
| Description: | No description for PF01061.15 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [650-727] |
1 11 21 31 41 51
| | | | | |
1 LVAVPQGMKV RLLATMSKSL GMRITSSTCL TTGYDILQQQ GVTDLTKWNC LWVTVAWGFF 60
61 FRILFYFSLL LGSKNKRR
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
