| Protein: | PDR15 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1529 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PDR15.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1521] | [26..1507] |
|
|
0.0 | [12..1528] | [3..1490] |
|
|
0.0 | [1..1519] | [54..1543] |
|
|
0.0 | [3..1525] | [2..1487] |
|
|
0.0 | [44..1519] | [13..1449] |
|
|
0.0 | [10..1526] | [4..1499] |
|
|
0.0 | [88..1519] | [12..1411] |
|
Region A: Residues: [1-151] |
1 11 21 31 41 51
| | | | | |
1 MSSDIRDVEE RNSRSSSSSS SSNSAAQSIG QHPYRGFDSE AAERVHELAR TLTSQSLLYT 60
61 ANSNNSSSSN HNAHNADSRS VFSTDMEGVN PVFTNPDTPG YNPKLDPNSD QFSSTAWVQN 120
121 MANICTSDPD FYKPYSLGCV WKNLSASGDS A
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.273 | a.1.1 | Globin-like |
| View | Download | 0.243 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.405 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.312 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.405 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.312 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.273 | a.1.1 | Globin-like |
| View | Download | 0.258 | a.1.1 | Globin-like |
| View | Download | 0.258 | a.1.1 | Globin-like |
| View | Download | 0.243 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.213 | d.122.1 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |
|
Region A: Residues: [152-244] |
1 11 21 31 41 51
| | | | | |
1 DVSYQSTFAN IVPKLLTKGL RLLKPSKEED TFQILKPMDG CLNPGELLVV LGRPGSGCTT 60
61 LLKSISSNSH GFKIAKDSIV SYNGLSSSDI RKH
|
| Detection Method: | |
| Confidence: | 125.154902 |
| Match: | 1f3oA_ |
| Description: | MJ0796 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 6.58863529263644 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 6.58067278719409 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of substances | 6.57974651657836 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 6.57922174989907 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 6.57807080367604 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 6.48406410175216 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 6.48154954364331 | bayes_pls_golite062009 |
| pyrophosphatase activity | 6.40467109535527 | bayes_pls_golite062009 |
| ATPase activity, coupled | 6.40151534181487 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 6.38373914253885 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 6.38247436082206 | bayes_pls_golite062009 |
| ATPase activity | 6.30019941712404 | bayes_pls_golite062009 |
| hydrolase activity | 5.13885856289543 | bayes_pls_golite062009 |
| sterol transporter activity | 4.45355165759136 | bayes_pls_golite062009 |
| hydrogen ion transporting ATP synthase activity, rotational mechanism | 3.57926427233638 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.4837867129694 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 3.40690615950081 | bayes_pls_golite062009 |
| ribonucleotide binding | 3.40594996232845 | bayes_pls_golite062009 |
| purine nucleotide binding | 3.3669118613715 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 3.35436118751376 | bayes_pls_golite062009 |
| nucleotide binding | 3.33248266870364 | bayes_pls_golite062009 |
| ATP binding | 3.17398570826788 | bayes_pls_golite062009 |
| lipid transporter activity | 3.14635082108971 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 3.12628113185041 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 3.08390071341252 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 3.0710107594224 | bayes_pls_golite062009 |
| iron ion transmembrane transporter activity | 3.05511942104215 | bayes_pls_golite062009 |
| drug transmembrane transporter activity | 2.97119034312001 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.95886887664984 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 2.88476360771975 | bayes_pls_golite062009 |
| cholesterol transporter activity | 2.72457626066894 | bayes_pls_golite062009 |
| amine-transporting ATPase activity | 2.69529191205818 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 2.67957846350199 | bayes_pls_golite062009 |
| carboxylic acid transmembrane transporter activity | 2.67815672695824 | bayes_pls_golite062009 |
| hydrogen ion transmembrane transporter activity | 2.61311581579476 | bayes_pls_golite062009 |
| inorganic cation transmembrane transporter activity | 2.40292717311506 | bayes_pls_golite062009 |
| transcription regulator activity | 2.32253394491642 | bayes_pls_golite062009 |
| amine transmembrane transporter activity | 2.29486577878686 | bayes_pls_golite062009 |
| 2.20174656498665 | bayes_pls_golite062009 | |
| eye pigment precursor transporter activity | 2.19742277986318 | bayes_pls_golite062009 |
| apolipoprotein receptor activity | 2.15656963765495 | bayes_pls_golite062009 |
| syntaxin-13 binding | 2.15656963765495 | bayes_pls_golite062009 |
| apolipoprotein A-I binding | 2.15656963765495 | bayes_pls_golite062009 |
| apolipoprotein A-I receptor activity | 2.15656963765495 | bayes_pls_golite062009 |
| anion transmembrane-transporting ATPase activity | 2.12727614888121 | bayes_pls_golite062009 |
| DNA binding | 1.998202240501 | bayes_pls_golite062009 |
| transporter activity | 1.9862037182943 | bayes_pls_golite062009 |
| proton-transporting ATPase activity, rotational mechanism | 1.95782378818812 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.91091452720653 | bayes_pls_golite062009 |
| inorganic anion transmembrane transporter activity | 1.88153949603611 | bayes_pls_golite062009 |
| transition metal ion transmembrane transporter activity | 1.82177108193332 | bayes_pls_golite062009 |
| nucleic acid binding | 1.75861394475305 | bayes_pls_golite062009 |
| fluconazole transporter activity | 1.75428613304237 | bayes_pls_golite062009 |
| azole transporter activity | 1.75428613304237 | bayes_pls_golite062009 |
| protein transporter activity | 1.71214667007262 | bayes_pls_golite062009 |
| binding | 1.64221234725269 | bayes_pls_golite062009 |
| transcription factor activity | 1.62603723026304 | bayes_pls_golite062009 |
| amino acid transmembrane transporter activity | 1.59627719545436 | bayes_pls_golite062009 |
| monovalent inorganic cation transmembrane transporter activity | 1.58971273330352 | bayes_pls_golite062009 |
| signal recognition particle binding | 1.46975774710831 | bayes_pls_golite062009 |
| peptide-transporting ATPase activity | 1.37783759788533 | bayes_pls_golite062009 |
| cation channel activity | 1.33585529285301 | bayes_pls_golite062009 |
| sterol-transporting ATPase activity | 1.30536878174919 | bayes_pls_golite062009 |
| glycoprotein transporter activity | 1.30536878174919 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of ions | 1.23799860254751 | bayes_pls_golite062009 |
| protein binding | 1.22129154759482 | bayes_pls_golite062009 |
| peptide transporter activity | 1.19353064661766 | bayes_pls_golite062009 |
| potassium channel activity | 1.17288958041707 | bayes_pls_golite062009 |
| voltage-gated cation channel activity | 1.00384984515681 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| voltage-gated ion channel activity | 0.889208591820696 | bayes_pls_golite062009 |
| motor activity | 0.87979065815418 | bayes_pls_golite062009 |
| voltage-gated channel activity | 0.871525745291603 | bayes_pls_golite062009 |
| 0.869999622006359 | bayes_pls_golite062009 | |
| ion channel activity | 0.848261056209476 | bayes_pls_golite062009 |
| GTPase activity | 0.83849854735032 | bayes_pls_golite062009 |
| channel activity | 0.806331380134838 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 0.806331380134838 | bayes_pls_golite062009 |
| substrate-specific channel activity | 0.799997700906738 | bayes_pls_golite062009 |
| di-, tri-valent inorganic cation transmembrane transporter activity | 0.767424210804186 | bayes_pls_golite062009 |
| phospholipid transporter activity | 0.755445322666929 | bayes_pls_golite062009 |
| gated channel activity | 0.650050847753837 | bayes_pls_golite062009 |
| guanyl nucleotide binding | 0.640772201693186 | bayes_pls_golite062009 |
| guanyl ribonucleotide binding | 0.63468044350616 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 0.62832939629645 | bayes_pls_golite062009 |
| GTP binding | 0.621689261700018 | bayes_pls_golite062009 |
| ribonucleoprotein binding | 0.53788302029845 | bayes_pls_golite062009 |
| branched-chain aliphatic amino acid transmembrane transporter activity | 0.442220326523999 | bayes_pls_golite062009 |
| anion transmembrane transporter activity | 0.43332053110728 | bayes_pls_golite062009 |
| canalicular bile acid transmembrane transporter activity | 0.301752323171649 | bayes_pls_golite062009 |
| signal transducer activity | 0.286367085584159 | bayes_pls_golite062009 |
| molecular transducer activity | 0.286367085584159 | bayes_pls_golite062009 |
| cation binding | 0.253391232867478 | bayes_pls_golite062009 |
| metal ion binding | 0.253391232867478 | bayes_pls_golite062009 |
| ion binding | 0.248991620791616 | bayes_pls_golite062009 |
| neutral amino acid transmembrane transporter activity | 0.227570438294493 | bayes_pls_golite062009 |
| G-protein coupled receptor activity | 0.169034229773346 | bayes_pls_golite062009 |
| amino acid-transporting ATPase activity | 0.147644650870465 | bayes_pls_golite062009 |
| microtubule motor activity | 0.11674780318211 | bayes_pls_golite062009 |
| transition metal ion binding | 0.113886856088787 | bayes_pls_golite062009 |
| cation-transporting ATPase activity | 0.0536898657672154 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.050232896280066 | bayes_pls_golite062009 |
| transcription activator activity | 0.0291047953833683 | bayes_pls_golite062009 |
|
Region A: Residues: [245-445] |
1 11 21 31 41 51
| | | | | |
1 YRGEVVYNAE SDIHLPHLTV YQTLFTVARM KTPQNRIKGV DREAYANHVT EVAMATYGLS 60
61 HTRDTKVGND LVRGVSGGER KRVSIAEVAI CGARFQCWDN ATRGLDSATA LEFIRALKTQ 120
121 ADIGKTAATV AIYQCSQDAY DLFDKVCVLD DGYQLYFGPA KDAKKYFQDM GYYCPPRQTT 180
181 ADFLTSITSP TERIISKEFI E
|
| Detection Method: | |
| Confidence: | 125.154902 |
| Match: | 1f3oA_ |
| Description: | MJ0796 |
| Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| lipid transporter activity | 7.47642599298853 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of substances | 5.57844095962502 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 5.57813579764186 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 5.57813579764186 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 5.5689620139321 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 5.55992639965745 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 5.50005167063544 | bayes_pls_golite062009 |
| ATPase activity, coupled | 4.98276715440477 | bayes_pls_golite062009 |
| ATPase activity | 4.69795387297193 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 4.45923622153365 | bayes_pls_golite062009 |
| sterol transporter activity | 4.45355165759136 | bayes_pls_golite062009 |
| pyrophosphatase activity | 4.39781350157199 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 4.38133275795019 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 4.38085303582726 | bayes_pls_golite062009 |
| transporter activity | 3.71239480053329 | bayes_pls_golite062009 |
| hydrolase activity | 3.67426835966263 | bayes_pls_golite062009 |
| hydrogen ion transporting ATP synthase activity, rotational mechanism | 3.57926427233638 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 3.35436118751376 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.13960906549884 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.1318898376276 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 3.08390071341252 | bayes_pls_golite062009 |
| iron ion transmembrane transporter activity | 3.05511942104215 | bayes_pls_golite062009 |
| ATP binding | 3.01346604299372 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.00745742755195 | bayes_pls_golite062009 |
| drug transmembrane transporter activity | 2.97119034312001 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 2.96271391116269 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 2.91131545957759 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 2.88476360771975 | bayes_pls_golite062009 |
| cholesterol transporter activity | 2.72457626066894 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 2.70262534541085 | bayes_pls_golite062009 |
| ribonucleotide binding | 2.70178191749524 | bayes_pls_golite062009 |
| amine-transporting ATPase activity | 2.69529191205818 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 2.67957846350199 | bayes_pls_golite062009 |
| carboxylic acid transmembrane transporter activity | 2.67815672695824 | bayes_pls_golite062009 |
| purine nucleotide binding | 2.6583477492092 | bayes_pls_golite062009 |
| nucleotide binding | 2.62374702628143 | bayes_pls_golite062009 |
| hydrogen ion transmembrane transporter activity | 2.61311581579476 | bayes_pls_golite062009 |
| inorganic cation transmembrane transporter activity | 2.40292717311506 | bayes_pls_golite062009 |
| amine transmembrane transporter activity | 2.29486577878686 | bayes_pls_golite062009 |
| 2.20174656498665 | bayes_pls_golite062009 | |
| eye pigment precursor transporter activity | 2.19742277986318 | bayes_pls_golite062009 |
| apolipoprotein A-I receptor activity | 2.15656963765495 | bayes_pls_golite062009 |
| apolipoprotein receptor activity | 2.15656963765495 | bayes_pls_golite062009 |
| apolipoprotein A-I binding | 2.15656963765495 | bayes_pls_golite062009 |
| syntaxin-13 binding | 2.15656963765495 | bayes_pls_golite062009 |
| anion transmembrane-transporting ATPase activity | 2.12727614888121 | bayes_pls_golite062009 |
| proton-transporting ATPase activity, rotational mechanism | 1.95782378818812 | bayes_pls_golite062009 |
| inorganic anion transmembrane transporter activity | 1.88153949603611 | bayes_pls_golite062009 |
| binding | 1.84115074893083 | bayes_pls_golite062009 |
| transition metal ion transmembrane transporter activity | 1.82177108193332 | bayes_pls_golite062009 |
| azole transporter activity | 1.75428613304237 | bayes_pls_golite062009 |
| fluconazole transporter activity | 1.75428613304237 | bayes_pls_golite062009 |
| protein transporter activity | 1.71214667007262 | bayes_pls_golite062009 |
| nucleic acid binding | 1.62884148289979 | bayes_pls_golite062009 |
| amino acid transmembrane transporter activity | 1.59627719545436 | bayes_pls_golite062009 |
| monovalent inorganic cation transmembrane transporter activity | 1.58971273330352 | bayes_pls_golite062009 |
| DNA binding | 1.53176391519962 | bayes_pls_golite062009 |
| transcription regulator activity | 1.49517431175162 | bayes_pls_golite062009 |
| signal recognition particle binding | 1.46975774710831 | bayes_pls_golite062009 |
| peptide-transporting ATPase activity | 1.37783759788533 | bayes_pls_golite062009 |
| cation channel activity | 1.33585529285301 | bayes_pls_golite062009 |
| glycoprotein transporter activity | 1.30536878174919 | bayes_pls_golite062009 |
| sterol-transporting ATPase activity | 1.30536878174919 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of ions | 1.23799860254751 | bayes_pls_golite062009 |
| protein binding | 1.22129154759482 | bayes_pls_golite062009 |
| peptide transporter activity | 1.19353064661766 | bayes_pls_golite062009 |
| potassium channel activity | 1.17288958041707 | bayes_pls_golite062009 |
| voltage-gated cation channel activity | 1.00384984515681 | bayes_pls_golite062009 |
| voltage-gated ion channel activity | 0.889208591820696 | bayes_pls_golite062009 |
| motor activity | 0.87979065815418 | bayes_pls_golite062009 |
| voltage-gated channel activity | 0.871525745291603 | bayes_pls_golite062009 |
| 0.869999622006359 | bayes_pls_golite062009 | |
| ion channel activity | 0.848261056209476 | bayes_pls_golite062009 |
| GTPase activity | 0.83849854735032 | bayes_pls_golite062009 |
| channel activity | 0.806331380134838 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 0.806331380134838 | bayes_pls_golite062009 |
| substrate-specific channel activity | 0.799997700906738 | bayes_pls_golite062009 |
| di-, tri-valent inorganic cation transmembrane transporter activity | 0.767424210804186 | bayes_pls_golite062009 |
| phospholipid transporter activity | 0.755445322666929 | bayes_pls_golite062009 |
| gated channel activity | 0.650050847753837 | bayes_pls_golite062009 |
| guanyl nucleotide binding | 0.640772201693186 | bayes_pls_golite062009 |
| guanyl ribonucleotide binding | 0.63468044350616 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 0.62832939629645 | bayes_pls_golite062009 |
| GTP binding | 0.621689261700018 | bayes_pls_golite062009 |
| ribonucleoprotein binding | 0.53788302029845 | bayes_pls_golite062009 |
| branched-chain aliphatic amino acid transmembrane transporter activity | 0.442220326523999 | bayes_pls_golite062009 |
| anion transmembrane transporter activity | 0.43332053110728 | bayes_pls_golite062009 |
| catalytic activity | 0.368034275052766 | bayes_pls_golite062009 |
| transcription factor activity | 0.344643343870781 | bayes_pls_golite062009 |
| canalicular bile acid transmembrane transporter activity | 0.301752323171649 | bayes_pls_golite062009 |
| signal transducer activity | 0.286367085584159 | bayes_pls_golite062009 |
| molecular transducer activity | 0.286367085584159 | bayes_pls_golite062009 |
| neutral amino acid transmembrane transporter activity | 0.227570438294493 | bayes_pls_golite062009 |
| G-protein coupled receptor activity | 0.169034229773346 | bayes_pls_golite062009 |
| amino acid-transporting ATPase activity | 0.147644650870465 | bayes_pls_golite062009 |
| microtubule motor activity | 0.11674780318211 | bayes_pls_golite062009 |
| cation-transporting ATPase activity | 0.0536898657672154 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.050232896280066 | bayes_pls_golite062009 |
| transcription activator activity | 0.0291047953833683 | bayes_pls_golite062009 |
|
Region A: Residues: [446-507] |
1 11 21 31 41 51
| | | | | |
1 KGTRVPQTPK DMAEYWLQSE SYKNLIKDID STLEKNTDEA RNIIRDAHHA KQAKRAPPSS 60
61 PY
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.522 | a.77.1 | DEATH domain |
| View | Download | 0.394 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.601 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.533 | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
| View | Download | 0.514 | a.77.1 | DEATH domain |
| View | Download | 0.367 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.359 | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| View | Download | 0.353 | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.347 | a.140.1 | LEM domain |
| View | Download | 0.337 | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.328 | a.5.2 | UBA-like |
| View | Download | 0.317 | a.32.1 | Transcription factor IIA (TFIIA), alpha-helical domain |
| View | Download | 0.309 | a.157.1 | Skp1 dimerisation domain-like |
| View | Download | 0.299 | a.5.7 | 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain |
| View | Download | 0.296 | a.5.2 | UBA-like |
| View | Download | 0.258 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.258 | d.150.1 | 4'-phosphopantetheinyl transferase |
| View | Download | 0.251 | d.15.2 | CAD & PB1 domains |
| View | Download | 0.247 | a.5.6 | Hypothetical protein MTH1615 |
| View | Download | 0.242 | a.144.2 | Ribosomal protein L20 |
| View | Download | 0.209 | a.20.1 | PGBD-like |
|
Region A: Residues: [508-648] |
1 11 21 31 41 51
| | | | | |
1 VVNYGMQVKY LLIRNFWRMK QSASVTLWQV IGNSVMAFIL GSMFYKVMKK NDTSTFYFRG 60
61 AAMFFAILFN AFSCLLEIFS LYETRPITEK HRTYSLYHPS ADAFASVLSE MPPKLITAVC 120
121 FNIIFYFLVD FRRNGGVFFF Y
|
|
Region B: Residues: [667-860] |
1 11 21 31 41 51
| | | | | |
1 GSLTKTLQEA MVPASMLLLA ISMYTGFAIP KTKILGWSIW IWYINPLAYL FESLMINEFH 60
61 DRRFPCAQYI PAGPAYQNIT GTQRVCSAVG AYPGNDYVLG DDFLKESYDY EHKHKWRGFG 120
121 IGMAYVVFFF FVYLILCEYN EGAKQKGEMV VFLRSKIKQL KKEGKLQEKH RPGDIENNAG 180
181 SSPDSATTEK KILD
|
| Detection Method: | |
| Confidence: | 149.228787 |
| Match: | 1jsqA_ |
| Description: | MsbA |
Matching Structure (courtesy of the PDB): |
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Region A: Residues: [649-666] |
1 11 21 31 41 51
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1 FLINVIATFT LSHLFRCV
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Region B: Residues: [861-1134] |
1 11 21 31 41 51
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1 DSSEGSDSSS DNAGLGLSKS EAIFHWRDLC YDVPIKGGQR RILNNVDGWV KPGTLTALMG 60
61 ASGAGKTTLL DCLAERVTMG VITGNIFVDG RLRDESFPRS IGYCQQQDLH LKTATVRESL 120
121 RFSAYLRQPS SVSIEEKNRY VEEVIKILEM QQYSDAVVGV AGEGLNVEQR KRLTIGVELA 180
181 ARPKLLVFLD EPTSGLDSQT AWDTCQLMRK LATHGQAILC TIHQPSAILM QQFDRLLFLQ 240
241 KGGQTVYFGD LGEGCKTMID YFESKGAHKC PPDA
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| Detection Method: | |
| Confidence: | 149.228787 |
| Match: | 1jsqA_ |
| Description: | MsbA |
| Matching Structure (courtesy of the PDB): |
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Region A: Residues: [1135-1437] |
1 11 21 31 41 51
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1 NPAEWMLEVV GAAPGSHATQ DYNEVWRNSD EYKAVQEELD WMEKNLPGRS KEPTAEEHKP 60
61 FAASLYYQFK MVTIRLFQQY WRSPDYLWSK FILTIFNQVF IGFTFFKADR SLQGLQNQML 120
121 SIFMYTVIFN PILQQYLPSF VQQRDLYEAR ERPSRTFSWL AFFLSQIIVE IPWNILAGTI 180
181 AYCIYYYAVG FYANASAAGQ LHERGALFWL FSIAFYVYIG SMGLLMISFN EVAETAAHMG 240
241 TLLFTMALSF CGVMATPKVM PRFWIFMYRV SPLTYMIDAL LALGVANVDV KCSNYEMVKF 300
301 TPP
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| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
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Region A: Residues: [1438-1529] |
1 11 21 31 41 51
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1 SGTTCGDYMA SYIKLAGTGY LSDPSATDIC SFCAVSTTNA FLATFSSHYY RRWRNYGIFI 60
61 CYIAFDYIAA TFLYWLSRVP KKNGKISEKP KK
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.444 | d.15.1 | Ubiquitin-like |
| View | Download | 0.669 | a.77.1 | DEATH domain |
| View | Download | 0.527 | c.52.2 | tRNA splicing endonuclease, C-terminal domain |
| View | Download | 0.525 | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.439 | a.64.1 | Saposin |
| View | Download | 0.419 | d.58.3 | Protease propeptides/inhibitors |
| View | Download | 0.416 | a.2.3 | Chaperone J-domain |
| View | Download | 0.414 | c.55.7 | Methylated DNA-protein cysteine methyltransferase domain |
| View | Download | 0.395 | d.192.1 | YlxR-like |
| View | Download | 0.382 | d.15.2 | CAD & PB1 domains |
| View | Download | 0.376 | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.368 | c.30.1 | PreATP-grasp domain |
| View | Download | 0.367 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.363 | a.60.13 | Putative methyltransferase TM0872, insert domain |
| View | Download | 0.363 | d.15.2 | CAD & PB1 domains |
| View | Download | 0.355 | a.60.2 | RuvA domain 2-like |
| View | Download | 0.352 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.348 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.338 | a.39.1 | EF-hand |
| View | Download | 0.336 | a.59.1 | PAH2 domain |
| View | Download | 0.309 | c.55.7 | Methylated DNA-protein cysteine methyltransferase domain |
| View | Download | 0.302 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.300 | a.77.1 | DEATH domain |
| View | Download | 0.300 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.298 | c.58.1 | Aminoacid dehydrogenase-like, N-terminal domain |
| View | Download | 0.288 | c.55.7 | Methylated DNA-protein cysteine methyltransferase domain |
| View | Download | 0.279 | a.85.1 | Hemocyanin, N-terminal domain |
| View | Download | 0.277 | d.15.1 | Ubiquitin-like |
| View | Download | 0.277 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.271 | d.211.1 | Ankyrin repeat |
| View | Download | 0.265 | d.222.1 | YbaB-like |
| View | Download | 0.264 | d.94.2 | Putative transcriptional regulator TM1602, C-terminal domain |
| View | Download | 0.263 | a.2.1 | GreA transcript cleavage protein, N-terminal domain |
| View | Download | 0.262 | b.1.2 | Fibronectin type III |
| View | Download | 0.261 | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.253 | a.64.1 | Saposin |
| View | Download | 0.245 | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.244 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.232 | a.66.1 | Transducin (alpha subunit), insertion domain |
| View | Download | 0.230 | d.50.3 | PI-Pfui intein middle domain |
| View | Download | 0.213 | d.228.1 | Replication modulator SeqA, C-terminal DNA-binding domain |
| View | Download | 0.207 | d.93.1 | SH2 domain |
| View | Download | 0.205 | a.11.2 | Second domain of FERM |
