| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.083] [SVM Score: 0.793399203438] |
| Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| protein phosphatase type 1 complex | 1.0611E-6 | 2 | 7 | 2 | 6292 |
| protein serine/threonine phosphatase complex | 6.8716E-6 | 2 | 17 | 2 | 6292 |
| mating projection base | 2.224E-3 | 2 | 7 | 1 | 6292 |
| mRNA cleavage and polyadenylation specificity factor complex | 4.7627E-3 | 2 | 15 | 1 | 6292 |
| mRNA cleavage factor complex | 6.3477E-3 | 2 | 20 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| heat shock protein binding | 9.5344E-4 | 2 | 3 | 1 | 6292 |
| protein phosphatase type 1 regulator activity | 3.811E-3 | 2 | 12 | 1 | 6292 |
| phosphatase regulator activity | 7.2981E-3 | 2 | 23 | 1 | 6292 |
| protein phosphatase regulator activity | 7.2981E-3 | 2 | 23 | 1 | 6292 |
| protein serine/threonine phosphatase activity | 8.248E-3 | 2 | 26 | 1 | 6292 |