| From Publication: | Qiu J, Noble WS (2008) Predicting Co-Complexed Protein Pairs from Heterogeneous Data. PLoS Comput Biol 4(4): e1000054. doi:10.1371/journal.pcbi.1000054 |
| Notes: | Classifier used Gene Ontology annotations. [FDR: 0.084] [SVM Score: 0.459530428531] |
| Complex Size: | 2 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| chromosome, telomeric region | 1.7735E-5 | 2 | 27 | 2 | 6292 |
| transcription export complex | 1.2712E-3 | 2 | 4 | 1 | 6292 |
| chromosomal part | 1.413E-3 | 2 | 237 | 2 | 6292 |
| chromosome | 1.8898E-3 | 2 | 274 | 2 | 6292 |
| nuclear telomeric heterochromatin | 2.224E-3 | 2 | 7 | 1 | 6292 |
| telomeric heterochromatin | 2.224E-3 | 2 | 7 | 1 | 6292 |
| nuclear heterochromatin | 2.224E-3 | 2 | 7 | 1 | 6292 |
| heterochromatin | 2.224E-3 | 2 | 7 | 1 | 6292 |
| chromatin silencing complex | 2.859E-3 | 2 | 9 | 1 | 6292 |
| telomere cap complex | 3.4937E-3 | 2 | 11 | 1 | 6292 |
| nuclear telomere cap complex | 3.4937E-3 | 2 | 11 | 1 | 6292 |
| nuclear chromosome, telomeric region | 7.2981E-3 | 2 | 23 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| structural constituent of chromatin | 6.3568E-4 | 2 | 2 | 1 | 6292 |
| histone binding | 4.4455E-3 | 2 | 14 | 1 | 6292 |
| ATP-dependent RNA helicase activity | 8.8811E-3 | 2 | 28 | 1 | 6292 |
| RNA-dependent ATPase activity | 9.1975E-3 | 2 | 29 | 1 | 6292 |
| protein binding | 9.4468E-3 | 2 | 612 | 2 | 6292 |