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Protein Overview: YNL035C

General Information:
Name(s) found: YNL035C [SGD]
Description(s) found:
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  • gi|6324293|ref|NP_014363.1| Putative protein of unknown function with similarity to proteins containing WD-40 domains; green fluorescent protein (GFP)-fusion protein localizes to the nucleus; YNL035C is not an essential gene; Ynl035cp [Saccharomyces cerev [NCBI NR]
  • pir||S62957 hypothetical protein YNL035c - yeast (Saccharomyces cerevisiae) [NCBI NR]
  • gi|1730722|sp|P53962.1|YND5_YEAST RecName: Full=Uncharacterized WD repeat-containing protein YNL035C [NCBI NR]
  • gi|1301880|emb|CAA95900.1| unnamed protein product [Saccharomyces cerevisiae] [NCBI NR]
  • Uncharacterized WD repeat-containing protein YNL035C OS=Saccharomyces cerevisiae GN=YNL035C PE=1 SV=1 [Swiss-Prot]
  • Protein of unknown function localised to nucleus [mips]
  • Putative protein of unknown function with similarity to proteins containing WD-40 domains; green fluorescent protein (GFP)-fusion protein localizes to the nucleus; YNL035C is not an essential gene [SGD]
  • YNL035C, Chr XIV from 568518-569687, reverse complement [yeast_orfs2]
  • Chr XIV from 568518-569687, reverse complement [yeastorf3.fasta]
  • Chr XIV from 569687-568518, reverse complement [yeastorf5.fasta]
  • (P53962) Hypothetical 43.8 kDa Trp-Asp repeats containing protein in NCE3-HHT2 intergenic region [4932.FASTACCERV.txt]
  • YNL035C SGDID:S0004980, Chr XIV from 569689-568520, reverse complement, Uncharacterized ORF [yeastflysequest.fasta]
  • YNL035C SGDID:S0004980, Chr XIV from 569690-568521, reverse complement, Uncharacterized ORF [10112005cervSGD.fasta]
  • Ynl035cp [Saccharomyces cerevisiae]gi|1301880|emb|CAA95900.1| unnamed protein product [Saccharomyces cerevisiae]gi|1730722|sp|P53962|YND5_YEAST Hypothetical 43.8 kDa Trp-Asp repeats containing protein in NCE3-HHT2 intergenic regiongi|2131871|pir||S6295 [nrdb_11152004_Chlamydomonas]
  • YNL035C SGDID:S000004980, Chr XIV from 569692-568523, reverse complement, Uncharacterized ORF, "Hypothetical protein" [SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta]
  • YNL035C SGDID:S000004980, Chr XIV from 569692-568523, reverse complement, Uncharacterized ORF, "Putative protein of unknown function with similarity to proteins containing WD-40 domains; green fluorescent protein (GFP)-fusion protein localizes to the nucl [yeast-contam.fasta]
  • WD repeat protein YNL035C [nr-271106-contam.fasta]
  • Putative protein of unknown function with similarity to proteins containing WD-40 domains; green fluorescent protein (GFP)-fusion protein localizes to the nucleus; YNL035C is not an essential gene; Ynl035cp [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • unnamed protein product [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • YNL035C SGDID:S000004980, Chr XIV from 569693-568524, reverse complement, Uncharacterized ORF, "Putative protein of unknown function with similarity to proteins containing WD-40 domains; green fluorescent protein (GFP)-fusion protein localizes to the nucl [SGD_S-cerevisiae_na_01-05-2010_reversed.fasta]
  • YNL035C SGDID:S000004980, Chr XIV from 569692-568523, reverse complement, Uncharacterized ORF, "Putative protein of unknown function with similarity to proteins containing WD-40 domains; green fluorescent protein (GFP)-fusion protein localizes to the nucleus; YNL035C is not an essential gene" [yeast-bovrabprots.fasta]
  • [chemostatdb.fasta]
  • YNL035C SGDID:S000004980, Chr XIV from 569693-568524, reverse complement, Uncharacterized ORF, "Putative protein of unknown function with similarity to proteins containing WD-40 domains; green fluorescent protein (GFP)-fusion protein localizes to the nucleus; YNL035C is not an essential gene" [SGDyeast.20101221.fasta]
  • Uncharacterized WD repeat-containing protein YNL035C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YNL035C PE=1 SV=1 [UniProt_S_cerevisiae_20120516_05-16-2012_reversed.fasta]
  • YNL035C SGDID:S000004980, Chr XIV from 569691-568522, Genome Release 64-1-1, reverse complement, Uncharacterized ORF, "Putative protein of unknown function with similarity to proteins containing WD-40 domains; green fluorescent protein (GFP)-fusion protein localizes to the nucleus; YNL035C is not an essential gene" [yeast-030211-contam.fasta]
  • YNL035C SGDID:S000004980, Chr XIV from 569691-568522, Genome Release 64-2-1, reverse complement, Verified ORF, "Nuclear protein of unknown function; relocalizes to the cytosol in response to hypoxia; contains WD-40 domains; not an essential gene; protein abundance increases in response to DNA replication stress" [20141208_orf_trans.fasta]
    • Organism: Saccharomyces cerevisiae
    Length: 389 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASYSLVESN SFGSENWCLK LQPSYKHGLL TGLSNGEIRL LDWSTGKSVQ KIKASETAIN  60
   61 DMKVIGSDFS AGHLVSSASI DAVKVFDIRT NDRIAQIQNE ANSPFISLDS RHGLLACGTE 120
  121 LQGIDAAVYI YDIRKWDTPL RSLIDSHHDD VTCIKFHPSD VNILLSGSTD GYTNIYDLKQ 180
  181 DEEEDALHQV INYASIHSCG WLSPKRIFTL SHMETFAIHE LNDKSDELKE PQPLDFGDVR 240
  241 EIWNCDYVVD IYPGLIATGK TQENCGELCL LPFKDEKVDT ENGIVIPHAH GDEVVRDIFI 300
  301 PAQHSNMLYS CGEDGCVKIW ENKQGPLDIP ENFWDYSKKM NVLGDDDREG SINLDEPLII 360
  361 QKESVSTRPR KEKHKKAKKH SMKSRFKPY

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Riffle et al. (2010) (Unpublished Data) ENP1 HRP1 KAP104 NAB2 YNL035C
    View Details Krogan NJ, et al. (2006) INM2 YNL035C
    View Details Ho Y, et al. (2002) ADH4 ADR1 ARC1 AYR1 BGL2 CBP6 DIM1 DPS1 ENP1 FAA1 GAR1 GSP1 GSP2 HEM15 HRP1 HTA2 KAP104 KIN1 KTR3 MRT4 NAB2 NDE1 OAC1 PAA1 PET10 PET9 PGM2 PSD1 RPT4 TFG2 VMA8 YDL063C YHM2 YNL035C YRB1

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data YNL035C Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..389] PSI-BLAST 69.09691 beta1-subunit of the signal-transducing G protein heterotrimer
    2 View Details [314..389] PSI-BLAST 17.0 Arp2/3 complex 41 kDa subunit ARPC1


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle