| General Information: |
|
| Name(s) found: |
NUP85 /
YJR042W
[SGD]
|
| Description(s) found:
Found 31 descriptions. SHOW ALL |
|
| Organism: | Saccharomyces cerevisiae |
| Length: | 744 amino acids |
Gene Ontology: |
|
| Cellular Component: |
nuclear pore
[IDA ]
|
| Biological Process: |
mRNA export from nucleus
[IMP]
rRNA export from nucleus [TAS ]
nuclear envelope organization [IMP ]
nuclear pore organization [TAS ]
snRNP protein import into nucleus [TAS ]
mRNA-binding (hnRNP) protein import into nucleus [TAS ]
snRNA export from nucleus [TAS ]
tRNA export from nucleus [TAS ]
NLS-bearing substrate import into nucleus [TAS ]
protein export from nucleus [TAS ]
ribosomal protein import into nucleus [TAS ]
|
| Molecular Function: |
structural molecule activity
[TAS]
|
| Sequence: |
|
| Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51
| | | | | |
1 MTIDDSNRLL MDVDQFDFLD DGTAQLSNNK TDEEEQLYKR DPVSGAILVP MTVNDQPIEK 60
61 NGDKMPLKFK LGPLSYQNMA FITAKDKYKL YPVRIPRLDT SKEFSAYVSG LFEIYRDLGD 120
121 DRVFNVPTIG VVNSNFAKEH NATVNLAMEA ILNELEVFIG RVKDQDGRVN RFYELEESLT 180
181 VLNCLRTMYF ILDGQDVEEN RSEFIESLLN WINRSDGEPD EEYIEQVFSV KDSTAGKKVF 240
241 ETQYFWKLLN QLVLRGLLSQ AIGCIERSDL LPYLSDTCAV SFDAVSDSIE LLKQYPKDSS 300
301 STFREWKNLV LKLSQAFGSS ATDISGELRD YIEDFLLVIG GNQRKILQYS RTWYESFCGF 360
361 LLYYIPSLEL SAEYLQMSLE ANVVDITNDW EQPCVDIISG KIHSILPVME SLDSCTAAFT 420
421 AMICEAKGLI ENIFEGEKNS DDYSNEDNEM LEDLFSYRNG MASYMLNSFA FELCSLGDKE 480
481 LWPVAIGLIA LSATGTRSAK KMVIAELLPH YPFVTNDDIE WMLSICVEWR LPEIAKEIYT 540
541 TLGNQMLSAH NIIESIANFS RAGKYELVKS YSWLLFEASC MEGQKLDDPV LNAIVSKNSP 600
601 AEDDVIIPQD ILDCVVTNSM RQTLAPYAVL SQFYELRDRE DWGQALRLLL LLIEFPYLPK 660
661 HYLVLLVAKF LYPIFLLDDK KLMDEDSVAT VIEVIETKWD DADEKSSNLY ETIIEADKSL 720
721 PSSMATLLKN LRKKLNFKLC QAFM |
| PUBLICATION | TOPOLOGY | COCOMPLEXED PROTEINS | |
| View Details | Riffle et al. (2010) (Unpublished Data) |
|
NUP120 NUP145 NUP84 NUP85 SEC13 SEH1 |
| View Details | (MIPS) Mewes HW, et al. (2004) |
|
NUP120 NUP145 NUP84 NUP85 SEC13 SEH1 |
| View Details | Krogan NJ, et al. (2006) |
|
MEX67 NUP120 NUP145 NUP84 NUP85 SEH1 |
| View Details | Gavin AC, et al. (2006) |
|
NUP120 NUP145 NUP84 NUP85 SEC13 SEH1 |
| View Details | Gavin AC, et al. (2002) |
|
CKA1 CKA2 CKB1 DBP2 MRPS28 NUP120 NUP145 NUP84 NUP85 RPP2B SEC13 SEC16 SEC23 SEC31 SEH1 STM1 |
| View Details | Ho Y, et al. (2002) |
|
ADE13 CBP3 HEM15 NUP145 NUP84 NUP85 SEC13 SEH1 YMR209C |
| View Details | Qiu et al. (2008) |
|
GLE2 KAP120 NUP1 NUP100 NUP120 NUP133 NUP145 NUP157 NUP159 NUP170 NUP188 NUP2 NUP42 NUP82 NUP84 NUP85 POM152 SEC13 SEH1 |
The following runs contain data for this protein:
| BAIT | COMMENTS | PUBLICATION | |
| View Run | Sample 2- cpn2 from june 2005 | McCusker D, et al (2007) | |
| View Run | Sample 3 - cpn + atp, from june 2005 | McCusker D, et al (2007) | |
| View Run | #32 Asynchronous Prep-No Phosphopeptide enrichment | Keck JM, et al. (2011) | |
| View Run | #12 Mitotic Prep1-TiO2 Flowthrough | Keck JM, et al. (2011) |
SHOWING SINGLE HITS. [ Hide Single Hits ]
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| PROTEIN(S) | PUBLICATION | |
| View Data |
|
Huh WK, et al. (2003) |
Domains predicted:
| # | Region(s) | Method | Confidence | Match Description | |
| 1 | View Details | [1..134] |  |
N/A | No confident structure predictions are available. |
| 2 | View Details | [135..678] | |
2.008904 | View MSA. No confident structure predictions are available. |
| 3 | View Details | [679..744] | |
N/A | No confident structure predictions are available. |
| Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
| Confidence of classification: | 0.96 |
Source: Reynolds et al. (2008)