| Protein: | NUP85 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 744 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NUP85.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..744] | [1..744] |
|
|
0.0 | [69..696] | [36..643] |
|
|
0.0 | [175..700] | [163..647] |
|
|
0.0 | [137..691] | [100..605] |
|
|
0.0 | [99..697] | [3..559] |
|
|
0.0 | [180..674] | [166..655] |
|
|
0.0 | [139..696] | [100..605] |
|
|
0.0 | [135..696] | [96..605] |
|
Region A: Residues: [1-134] |
1 11 21 31 41 51
| | | | | |
1 MTIDDSNRLL MDVDQFDFLD DGTAQLSNNK TDEEEQLYKR DPVSGAILVP MTVNDQPIEK 60
61 NGDKMPLKFK LGPLSYQNMA FITAKDKYKL YPVRIPRLDT SKEFSAYVSG LFEIYRDLGD 120
121 DRVFNVPTIG VVNS
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [135-678] |
1 11 21 31 41 51
| | | | | |
1 NFAKEHNATV NLAMEAILNE LEVFIGRVKD QDGRVNRFYE LEESLTVLNC LRTMYFILDG 60
61 QDVEENRSEF IESLLNWINR SDGEPDEEYI EQVFSVKDST AGKKVFETQY FWKLLNQLVL 120
121 RGLLSQAIGC IERSDLLPYL SDTCAVSFDA VSDSIELLKQ YPKDSSSTFR EWKNLVLKLS 180
181 QAFGSSATDI SGELRDYIED FLLVIGGNQR KILQYSRTWY ESFCGFLLYY IPSLELSAEY 240
241 LQMSLEANVV DITNDWEQPC VDIISGKIHS ILPVMESLDS CTAAFTAMIC EAKGLIENIF 300
301 EGEKNSDDYS NEDNEMLEDL FSYRNGMASY MLNSFAFELC SLGDKELWPV AIGLIALSAT 360
361 GTRSAKKMVI AELLPHYPFV TNDDIEWMLS ICVEWRLPEI AKEIYTTLGN QMLSAHNIIE 420
421 SIANFSRAGK YELVKSYSWL LFEASCMEGQ KLDDPVLNAI VSKNSPAEDD VIIPQDILDC 480
481 VVTNSMRQTL APYAVLSQFY ELRDREDWGQ ALRLLLLLIE FPYLPKHYLV LLVAKFLYPI 540
541 FLLD
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [679-744] |
1 11 21 31 41 51
| | | | | |
1 DKKLMDEDSV ATVIEVIETK WDDADEKSSN LYETIIEADK SLPSSMATLL KNLRKKLNFK 60
61 LCQAFM
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
