Protein: | NUP85 |
Organism: | Saccharomyces cerevisiae |
Length: | 744 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NUP85.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..744] | [1..744] |
|
0.0 | [69..696] | [36..643] |
|
0.0 | [175..700] | [163..647] |
|
0.0 | [137..691] | [100..605] |
|
0.0 | [99..697] | [3..559] |
|
0.0 | [180..674] | [166..655] |
|
0.0 | [139..696] | [100..605] |
|
0.0 | [135..696] | [96..605] |
Region A: Residues: [1-134] |
1 11 21 31 41 51 | | | | | | 1 MTIDDSNRLL MDVDQFDFLD DGTAQLSNNK TDEEEQLYKR DPVSGAILVP MTVNDQPIEK 60 61 NGDKMPLKFK LGPLSYQNMA FITAKDKYKL YPVRIPRLDT SKEFSAYVSG LFEIYRDLGD 120 121 DRVFNVPTIG VVNS |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [135-678] |
1 11 21 31 41 51 | | | | | | 1 NFAKEHNATV NLAMEAILNE LEVFIGRVKD QDGRVNRFYE LEESLTVLNC LRTMYFILDG 60 61 QDVEENRSEF IESLLNWINR SDGEPDEEYI EQVFSVKDST AGKKVFETQY FWKLLNQLVL 120 121 RGLLSQAIGC IERSDLLPYL SDTCAVSFDA VSDSIELLKQ YPKDSSSTFR EWKNLVLKLS 180 181 QAFGSSATDI SGELRDYIED FLLVIGGNQR KILQYSRTWY ESFCGFLLYY IPSLELSAEY 240 241 LQMSLEANVV DITNDWEQPC VDIISGKIHS ILPVMESLDS CTAAFTAMIC EAKGLIENIF 300 301 EGEKNSDDYS NEDNEMLEDL FSYRNGMASY MLNSFAFELC SLGDKELWPV AIGLIALSAT 360 361 GTRSAKKMVI AELLPHYPFV TNDDIEWMLS ICVEWRLPEI AKEIYTTLGN QMLSAHNIIE 420 421 SIANFSRAGK YELVKSYSWL LFEASCMEGQ KLDDPVLNAI VSKNSPAEDD VIIPQDILDC 480 481 VVTNSMRQTL APYAVLSQFY ELRDREDWGQ ALRLLLLLIE FPYLPKHYLV LLVAKFLYPI 540 541 FLLD |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [679-744] |
1 11 21 31 41 51 | | | | | | 1 DKKLMDEDSV ATVIEVIETK WDDADEKSSN LYETIIEADK SLPSSMATLL KNLRKKLNFK 60 61 LCQAFM |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.