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Protein Overview: NUP85_ARATH

General Information:
Name(s) found: NUP85_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • Nuclear pore complex protein NUP85 OS=Arabidopsis thaliana GN=NUP85 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 716 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGMSSESGG GELVLFSTKE KTPVLYPLSY GLKSPVHRLS ISWGCGNNLR VTVLRNPELR  60
   61 DDDDGEVGGK VVNVRLSGED GEISDPQWRR IAYGSVSPFA LLQSRRNSIS SLSKMDMSSS 120
  121 LYQTAWWEYV MEYSRDIKSL LSNTISLPAP LIEDPRSVIK NAEEPTSLKA AWELMELFYA 180
  181 DKTCLSWLPE RLVDWLSEYD ILLSSSHPTI YSKLQDFQKE LVGLQAIEDD PRYWEVMASA 240
  241 LSVGWLEIVV KLLHLHGSYQ LDQLGHRETE NGLVEAVAVL ISKMPRMRPQ LEDGKFGECS 300
  301 AAKPDFMKTR ERWQSQITKL ECSAFWVQCA HHQTREGLRN MLKIMIGNAD CLRAATCNWM 360
  361 ELFVSHLLYL RPFTKGLDGM HSLAQKCVQS KPVNTSHKLL RLLIGILGEN TEVVLAECSK 420
  421 EFGSWMVAHA MELLTAGSEE GEVLVHEEQR KLGGINMEEL HRLVYAQVLS SHALTWQIAP 480
  481 IYLASCEKQG LGLLELLFYR QPVQENQMLI KSLEICRLYE LSNVSAKLMK ISGVHHWKHG 540
  541 RKGSGIFWLQ QARDENCLSV IAQQLFDSVG KSLSDESLKQ WEGLVELLGS ESQISGGLDF 600
  601 LHKYRDFKRS LKVVHDGKTI DAAHEAVERL VSLMKSPSTP QRFWLPLLHD SLKLLNWPER 660
  661 SLLNVTQTNL MLNKLQELSI ARLRPGFIES ELSAQAVGSV RLALATNLGR AFLEEC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..716] FFAS03 0.984 No description for 2qx5A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle