| General Information: |
|
| Name(s) found: |
YGR250C
[SGD]
|
| Description(s) found:
Found 25 descriptions. SHOW ALL |
|
| Organism: | Saccharomyces cerevisiae |
| Length: | 781 amino acids |
Gene Ontology: |
|
| Cellular Component: |
cytoplasm
[IDA ]
|
| Biological Process: |
biological_process
[ND]
|
| Molecular Function: |
RNA binding
[ISS]
|
| Sequence: |
|
| Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51
| | | | | |
1 MNIAEEPSDE VISSGPEDTD ICSQQTSASA EAGDQSIKIE RKTSTGLQLE QLANTNLLTI 60
61 RIKWQLQEEE DDHCNSRITD QIMDTIQHYK GISVNNSDTE TYEFLPDTRR LQVLEQNKDI 120
121 YLYEHGSQEY EKSYKDNEEE DDWRYDTVLQ AQFKYPKSLE NACTDISELL KSEPIGQHID 180
181 KWSIGVNKHA LTYPGNIFVG GIAKSLSIGE LSFLFSKYGP ILSMKLIYDK TKGEPNGYGF 240
241 ISYPLGSQAS LCIKELNGRT VNGSTLFINY HVERKERERI HWDHVKENNN DDNFRCLFIG 300
301 NLPYHNPEKV ETLITPKEVI EVIKKELSKK FPDFDIISYY FPKRSNTRSS SSVSFNEEGS 360
361 VESNKSSNNT NGNAQDEDML KGYGFIKLIN HEQALAAIET FNGFMWHGNR LVVNKAVQHK 420
421 VYNNHNSHDR HPSISNHNDM EVLEFANNPM YDYNNYTYDR YYFNNNKNGN SNDTSNVRYF 480
481 DSVRSTPVAE KMDLFYPQRE SFSEGRGQRV PRFMGNKFDM YQYPSTSYSL PIPMSNQQES 540
541 NLYVKHIPLS WTDEDLYDFY KSFGEIISVK VITVGGSKNK YRQQSNDSSS DNDLPVGSSR 600
601 GYGFVSFESP LDAAKAILNT DGYQVSKDQV LSVSFAQKRG NLSSSDDDDQ SQTDNSSKFQ 660
661 NFQPHNDYHK AYPTKYNKKF INALMTQNQS QQQVSRENYF IPLQYPNTNT KPVNSYNLIS 720
721 ANQNNANWMM PMFPSFGFIP QVPPVPYIIP PQNPAANHIP IMANGSNEEE EFSSGDYSMD 780
781 Y |
| PUBLICATION | TOPOLOGY | COCOMPLEXED PROTEINS | |
| View Details | Riffle et al. (2010) (Unpublished Data) |
|
SGN1 YGR250C |
| View Details | Krogan NJ, et al. (2006) |
|
ARG3 ATP3 BUD30 CIK1 GAL80 PMI40 SGN1 YGR250C YML002W YOR1 |
| View Details | Gavin AC, et al. (2006) |
|
PAB1 YGR250C |
| View Details | Gavin AC, et al. (2002) |
|
SGN1 SRV2 TDH3 TIF4631 TIF4632 YGR250C |
| View Details | Ho Y, et al. (2002) |
|
ADK1 CLU1 COP1 FUN12 GPH1 NAN1 NPL3 PDI1 PRP11 PUB1 REX2 SEC27 SGN1 SHM2 SPT2 SSK2 TFP1 THI22 TIF4631 TIF4632 UBP15 UTP13 YGR250C |
The following runs contain data for this protein:
| BAIT | COMMENTS | PUBLICATION | |
| View Run | No Comments | Schneider, DA, et al. (2006) | |
| View Run | Sample 2- cpn2 from june 2005 | McCusker D, et al (2007) | |
| View Run | Sample 3 - cpn + atp, from june 2005 | McCusker D, et al (2007) | |
| View Run | Sample bob1 (2nd set) from october 2005 | McCusker D, et al (2007) | |
| View Run | #03 Alpha Factor Prep1-TiO2 Flowthrough | Keck JM, et al. (2011) |
SHOWING SINGLE HITS. [ Hide Single Hits ]
| BAIT | PREY | HITS | PUBLICATION | |
| View Screen | 1 | Unpublished Fields Lab Data | ||
| View Screen | 1 | Unpublished Fields Lab Data | ||
| View Screen | 1 | Unpublished Fields Lab Data |
New Feature: Upload Your Own Microscopy Data
| PROTEIN(S) | PUBLICATION | |
| View Data |
|
Huh WK, et al. (2003) |
Domains predicted:
| # | Region(s) | Method | Confidence | Match Description | |
| 1 | View Details | [1..94] |  |
N/A | Confident ab initio structure predictions are available. |
| 2 | View Details | [95..186] | |
117.38764 | Hu antigen D (Hud) |
| 3 | View Details | [187..281] | |
123.218487 | Poly(A)-binding protein |
| 4 | View Details | [282..430] | |
123.218487 | Poly(A)-binding protein |
| 5 | View Details | [431..530] | |
32.491979 | Splicing factor U2AF 65 KDa subunit |
| 6 | View Details | [531..697] | |
4.69897 | No description for 1bnyA_ was found. |
| 7 | View Details | [698..781] | |
4.69897 | poly(A) binding protein |
| Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
| Confidence of classification: | 0.98 |
Source: Reynolds et al. (2008)