Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YGR250C.
Description | E-value | Query Range |
Subject Range |
|
491.0 | [0..187] | [779..3] |
|
476.0 | [0..191] | [779..7] |
Region A: Residues: [1-94] |
1 11 21 31 41 51 | | | | | | 1 MNIAEEPSDE VISSGPEDTD ICSQQTSASA EAGDQSIKIE RKTSTGLQLE QLANTNLLTI 60 61 RIKWQLQEEE DDHCNSRITD QIMDTIQHYK GISV |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.906 | d.204.1 | Ribosome binding protein Y (YfiA homologue) |
Region A: Residues: [95-186] |
1 11 21 31 41 51 | | | | | | 1 NNSDTETYEF LPDTRRLQVL EQNKDIYLYE HGSQEYEKSY KDNEEEDDWR YDTVLQAQFK 60 61 YPKSLENACT DISELLKSEP IGQHIDKWSI GV |
Detection Method: | ![]() |
Confidence: | 117.38764 |
Match: | 1fxlA |
Description: | Hu antigen D (Hud) |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [187-281] |
1 11 21 31 41 51 | | | | | | 1 NKHALTYPGN IFVGGIAKSL SIGELSFLFS KYGPILSMKL IYDKTKGEPN GYGFISYPLG 60 61 SQASLCIKEL NGRTVNGSTL FINYHVERKE RERIH |
Detection Method: | ![]() |
Confidence: | 123.218487 |
Match: | 1cvjA |
Description: | Poly(A)-binding protein |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [282-430] |
1 11 21 31 41 51 | | | | | | 1 WDHVKENNND DNFRCLFIGN LPYHNPEKVE TLITPKEVIE VIKKELSKKF PDFDIISYYF 60 61 PKRSNTRSSS SVSFNEEGSV ESNKSSNNTN GNAQDEDMLK GYGFIKLINH EQALAAIETF 120 121 NGFMWHGNRL VVNKAVQHKV YNNHNSHDR |
Detection Method: | ![]() |
Confidence: | 123.218487 |
Match: | 1cvjA |
Description: | Poly(A)-binding protein |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [431-530] |
1 11 21 31 41 51 | | | | | | 1 HPSISNHNDM EVLEFANNPM YDYNNYTYDR YYFNNNKNGN SNDTSNVRYF DSVRSTPVAE 60 61 KMDLFYPQRE SFSEGRGQRV PRFMGNKFDM YQYPSTSYSL |
Detection Method: | ![]() |
Confidence: | 32.491979 |
Match: | 2u2fA |
Description: | Splicing factor U2AF 65 KDa subunit |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [531-697] |
1 11 21 31 41 51 | | | | | | 1 PIPMSNQQES NLYVKHIPLS WTDEDLYDFY KSFGEIISVK VITVGGSKNK YRQQSNDSSS 60 61 DNDLPVGSSR GYGFVSFESP LDAAKAILNT DGYQVSKDQV LSVSFAQKRG NLSSSDDDDQ 120 121 SQTDNSSKFQ NFQPHNDYHK AYPTKYNKKF INALMTQNQS QQQVSRE |
Detection Method: | ![]() |
Confidence: | 4.69897 |
Match: | 1bnyA_ |
Description: | No description for 1bnyA_ was found. |
Region A: Residues: [698-781] |
1 11 21 31 41 51 | | | | | | 1 NYFIPLQYPN TNTKPVNSYN LISANQNNAN WMMPMFPSFG FIPQVPPVPY IIPPQNPAAN 60 61 HIPIMANGSN EEEEFSSGDY SMDY |
Detection Method: | ![]() |
Confidence: | 4.69897 |
Match: | 1g9lA |
Description: | poly(A) binding protein |
Matching Structure (courtesy of the PDB):![]() |