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Protein Overview: MRP20

General Information:
Name(s) found: MRP20 / YDR405W [SGD]
Description(s) found:
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  • gi|927336|gb|AAB64845.1| Mrp20p: mitochondrial 60S ribosomal protein L41; YDR405W; CAI: 0.09 [Saccharomyces cerevisiae] [NCBI NR]
  • gi|6320613|ref|NP_010693.1| Mitochondrial ribosomal protein of the large subunit; Mrp20p [Saccharomyces cerevisiae] [NCBI NR]
  • gi|417686|sp|P32387.1|RM41_YEAST RecName: Full=54S ribosomal protein L41, mitochondrial; AltName: Full=YmL41; Flags: Precursor [NCBI NR]
  • pir||B42105 ribosomal protein MRP20, mitochondrial - yeast (Saccharomyces cerevisiae) [NCBI NR]
  • gi|171973|gb|AAA34789.1| mitochondrial ribosomal protein [Saccharomyces cerevisiae] [NCBI NR]
  • 54S ribosomal protein L41, mitochondrial OS=Saccharomyces cerevisiae GN=MRP20 PE=1 SV=1 [Swiss-Prot]
  • MRP20 Mitochondrial ribosomal protein, large subunit [mips]
  • Mitochondrial ribosomal protein of the large subunit [SGD]
  • MRP20, Chr IV from 1277635-1278426 [yeast_orfs2]
  • Chr IV from 1277635-1278426 [yeastorf3.fasta]
  • Chr IV from 1277634-1278425 [yeastorf4.fasta]
  • (P32387) 60S ribosomal protein L41, mitochondrial precursor (YmL41) [4932.FASTACCERV.txt]
  • MRP20 SGDID:S0002813, Chr IV from 1277634-1278425, Verified ORF [yeastflysequest.fasta]
  • MRP20 SGDID:S0002813, Chr IV from 1277636-1278427, Verified ORF [10112005cervSGD.fasta]
  • Mitochondrial ribosomal protein of the large subunit [Saccharomyces cerevisiae]gi|283207|pir||B42105 ribosomal protein MRP20, mitochondrial - yeast (Saccharomyces cerevisiae)gi|927336|gb|AAB64845.1| Mrp20p: mitochondrial 60S ribosomal protein L41; YDR4 [nrdb_11152004_Chlamydomonas]
  • MRP20 SGDID:S000002813, Chr IV from 1277636-1278427, Verified ORF, "Mitochondrial ribosomal protein of the large subunit" [SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta]
  • MRP20 SGDID:S000002813, Chr IV from 1277638-1278429, Verified ORF, "Mitochondrial ribosomal protein of the large subunit" [yeast-contam.fasta]
  • MRP20 SGDID:S000002813, Chr IV from 1277639-1278430, Verified ORF, "Mitochondrial ribosomal protein of the large subunit" [SGD_S-cerevisiae_na_08-19-2008_con_reversed.fasta]
  • 60S ribosomal protein L41, mitochondrial precursor (YmL41) [nr-271106-contam.fasta]
  • Mitochondrial ribosomal protein of the large subunit; Mrp20p [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • mitochondrial ribosomal protein [nr-271106-contam.fasta]
  • Mrp20p: mitochondrial 60S ribosomal protein L41; YDR405W; CAI: 0.09 [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • [chemostatdb.fasta]
  • 54S ribosomal protein L41, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MRP20 PE=1 SV=1 [UniProt_S_cerevisiae_20120516_05-16-2012_reversed.fasta]
  • MRP20 SGDID:S000002813, Chr IV from 1277646-1278437, Genome Release 64-1-1, Verified ORF, "Mitochondrial ribosomal protein of the large subunit" [yeast-030211-contam.fasta]
  • MRP20 SGDID:S000002813, Chr IV from 1277646-1278437, Genome Release 64-2-1, Verified ORF, "Mitochondrial ribosomal protein of the large subunit" [20141208_orf_trans.fasta]
  • YDR405W SGDID:S000002813, Chr IV from 1277646-1278437, Genome Release 64-1-1, Verified ORF, "Mitochondrial ribosomal protein of the large subunit" [2016-01-SGD_Yeast_Contam_Riffle_20140507-Ska-Hec-110-tubulin.fasta]
  • ID=asmbl_99|g.125 ORF ID=asmbl_99|g.125 ID=asmbl_99|m.125 type:complete len:264 (+) ID=asmbl_99:141-932(+) [DBVPG6044_quiverGenomes_Trinity_v2_2_0_PASA_2June2016-contam.fasta]
    • Organism: Saccharomyces cerevisiae
    Length: 263 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDALink to PubMed article]
    mitochondrial large ribosomal subunit [IDALink to PubMed article]
    Biological Process: translation [IDALink to PubMed article]
    Molecular Function: structural constituent of ribosome [IDALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRLTVGTKN MLYPLQKTLA VGSCKPEQVP IRSLASVVES SSKILDKSGS DREVDINVSE  60
   61 KIYKWTKAGI EQGKEHFKVG GNKVYFPKAR IILLRPNAKH TPYQAKFIVP KSFNKLDLRD 120
  121 YLYHIYGLRA MNITTQLLHG KFNRMNLQTT RFREPQIKKM TIEMEEPFIW PEEPRPDENS 180
  181 FWDSTTPDNM EKYREERLNC LGSDANKPGT AFDGVVGPYE RVAQPFIPRF LKREIDNKRE 240
  241 RHAAELQRAD KLIALNRYIE DLH

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Riffle et al. (2010) (Unpublished Data) IMG1 MHR1 MRP20 MRP49 MRP7 MRPL1 MRPL13 MRPL20 MRPL25 MRPL3 MRPL35 MRPL36 MRPL4 MRPL7 MRPL8 YML6
    View Details (MIPS) Mewes HW, et al. (2004) IMG1 IMG2 MNP1 MRP20 MRP49 MRP7 MRPL1 MRPL10 MRPL11 MRPL13 MRPL15 MRPL16 MRPL17 MRPL19 MRPL20 MRPL22 MRPL23 MRPL24 MRPL25 MRPL27 MRPL28 MRPL3 MRPL31 MRPL32 MRPL33 MRPL35 MRPL36 MRPL37 MRPL38 MRPL39 MRPL4 MRPL40 MRPL44 MRPL49 MRPL50 MRPL51 MRPL6 MRPL7 MRPL8 MRPL9 RML2 RTC6 YDR115W YML6
    View Details Krogan NJ, et al. (2006) IMG2 MRP20 MRPL1 MRPL10 MRPL15 MRPL25 MRPL3 MRPL4 MRPL40 MRPL9
    View Details Gavin AC, et al. (2002) ATG26 BEM2 BUD3 COP1 CYR1 HRR25 IMG1 IMG2 IML1 MHR1 MRH4 MRM1 MRP20 MRP49 MRP7 MRPL1 MRPL10 MRPL13 MRPL16 MRPL17 MRPL19 MRPL20 MRPL23 MRPL24 MRPL25 MRPL27 MRPL28 MRPL3 MRPL35 MRPL36 MRPL39 MRPL4 MRPL44 MRPL51 MRPL6 MRPL7 MRPL8 NUG1 PRP43 RET2 ROM2 RTC6 SEC1 SEC26 SEC27 SIN4 SNF2 SWI3 SYP1 TAF5 UTP20 YDR115W YML6
    View Details Qiu et al. (2008) IMG1 IMG2 MHR1 MNP1 MRP1 MRP10 MRP13 MRP20 MRP21 MRP4 MRP49 MRP7 MRPL1 MRPL10 MRPL11 MRPL13 MRPL15 MRPL16 MRPL17 MRPL19 MRPL20 MRPL22 MRPL23 MRPL24 MRPL25 MRPL27 MRPL28 MRPL3 MRPL31 MRPL32 MRPL33 MRPL35 MRPL36 MRPL37 MRPL38 MRPL39 MRPL4 MRPL40 MRPL44 MRPL49 MRPL50 MRPL51 MRPL6 MRPL7 MRPL8 MRPL9 MRPS16 MRPS17 MRPS18 MRPS28 MRPS35 MRPS9 NAM9 RML2 RSM10 RSM18 RSM22 RSM23 RSM24 RSM25 RSM26 RSM27 RSM7 RTC6 SWS2 VAR1 YDR115W YML6

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data MRP20 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..80] deduced N/A No confident structure predictions are available.
    2 View Details [81..182] PSI-BLAST 20.09691 No description for 1lnrR_ was found.
    3 View Details [183..263] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle