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Protein Overview: FOB1

Protein Complex Data

  PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
View Details Qiu et al. (2008) FOB1 NET1 NSR1 TOP1 UTP9

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data FOB1 Huh WK, et al. (2003)
View Data FOB1 and NOP56 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..566] deduced N/A No confident structure predictions are available.
2 View Details [131..484] FFAS03 5.37 N-terminal Zn binding domain of HIV integrase; Retroviral integrase, catalytic domain
3 View Details [485..566] deduced N/A No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2
Term Confidence Notes
  • exonuclease activity
  • 2.69169803889636 bayes_pls_golite062009
  • nuclease activity
  • 2.63308556411438 bayes_pls_golite062009
  • 3'-5'-exoribonuclease activity
  • 2.43802973446357 bayes_pls_golite062009
  • transcription regulator activity
  • 2.22832306273638 bayes_pls_golite062009
  • ribonuclease activity
  • 2.21640837000075 bayes_pls_golite062009
  • nucleic acid binding
  • 2.15202443486046 bayes_pls_golite062009
  • DNA binding
  • 1.88388568255929 bayes_pls_golite062009
  • exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters
  • 1.66403897673963 bayes_pls_golite062009
  • DNA polymerase activity
  • 1.57871253412659 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
  • 1.54823157746404 bayes_pls_golite062009
  • DNA-directed DNA polymerase activity
  • 1.44766638837068 bayes_pls_golite062009
  • binding
  • 1.42021256417703 bayes_pls_golite062009
  • transcription factor activity
  • 1.18792852183348 bayes_pls_golite062009
  • nucleotidyltransferase activity
  • 1.16950079926796 bayes_pls_golite062009
  • catalytic activity
  • 1.16880796007849 bayes_pls_golite062009
  • hydrolase activity
  • 1.02227964399726 bayes_pls_golite062009
  • 3'-5' exonuclease activity
  • 1.01792206204118 bayes_pls_golite062009
  • exoribonuclease activity
  • 0.985835839433199 bayes_pls_golite062009
  • exoribonuclease activity, producing 5'-phosphomonoesters
  • 0.91438167081716 bayes_pls_golite062009
  • deoxyribonuclease activity
  • 0.819269466567015 bayes_pls_golite062009
  • endonuclease activity
  • 0.591008475846166 bayes_pls_golite062009
  • 0.300511724300705 bayes_pls_golite062009
  • endoribonuclease activity, producing 5'-phosphomonoesters
  • 0.244405458380391 bayes_pls_golite062009
  • endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters
  • 0.152950127352174 bayes_pls_golite062009
  • transcription activator activity
  • 0.0924765766526223 bayes_pls_golite062009
  • protein binding
  • 0.0799098348667361 bayes_pls_golite062009
  • structure-specific DNA binding
  • 0.056513663571923 bayes_pls_golite062009
    3 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle