YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gpa-17
Organism: Caenorhabditis elegans
Length: 406 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gpa-17.

Description E-value Query
Range		 Subject
Range
gi|114662614 - gi|114662614|ref|XP_510976.2| PREDICTED: guanine nucleotide binding protein, alpha activating polype...
 384.0 [0..1] [405..184]

Back

Predicted Domain #1
Region A:
Residues: [1-406] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSLCSREED GNDTVTTMNG QNKKKTKKEG DIIHFFMLGI EGAGKTTIVR QLKCLCIQKP  60
   61 QSYQMYDDSW NLIDREKIFD NYELENLKNV VRINLLTAAN SLIRKVRETD EEHMRSSGAA 120
  121 AAVLRRCSQL YEAEVDIYDI SNQIEDEYGA YIIEILSDPQ IRRCLDQGPP VKIEDGTRFF 180
  181 LKDEGRIRNI FTHSYQLTND DIVHVRKPTV SFKSYKFRIK QLRVEIHDMG GQKSELVKIP 240
  241 QFMRQFLTTD GHCFLLYVSS LAAFQEPDKD VKGRTVLDKS AAIFKLVLEM NGVDECTVMI 300
  301 FFNKQDRFEE ICREMMQKED GKRQLEKVLG IPPKVQKEGK KGKPENYDHL KDAIRSRFKE 360
  361 ILKENNDKKS YYMKYTQATD AQLMSTIFYA VENEIISSYF TQARYI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 100.0
Match: 1svkA
Description: Structure of the K180P mutant of Gi alpha subunit bound to AlF4 and GDP
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
GTPase activity 5.72147024962513 bayes_pls_golite062009
hydrogen ion transporting ATP synthase activity, rotational mechanism 3.57926427233638 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 3.4837867129694 bayes_pls_golite062009
ion transmembrane transporter activity 3.35436118751376 bayes_pls_golite062009
transporter activity 3.10463051760206 bayes_pls_golite062009
cation transmembrane transporter activity 3.08390071341252 bayes_pls_golite062009
opioid receptor binding 3.0590320138875 bayes_pls_golite062009
mu-type opioid receptor binding 3.0590320138875 bayes_pls_golite062009
transmembrane transporter activity 2.95886887664984 bayes_pls_golite062009
nucleoside-triphosphatase activity 2.95079405147356 bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity 2.9271291809464 bayes_pls_golite062009
pyrophosphatase activity 2.87427509025394 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides 2.85499564954033 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 2.85178667290149 bayes_pls_golite062009
binding 2.64537357529343 bayes_pls_golite062009
hydrogen ion transmembrane transporter activity 2.63419811368692 bayes_pls_golite062009
primary active transmembrane transporter activity 2.61775212528604 bayes_pls_golite062009
P-P-bond-hydrolysis-driven transmembrane transporter activity 2.61467977505707 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances 2.57552435627908 bayes_pls_golite062009
ATPase activity, coupled to transmembrane movement of substances 2.57107347424517 bayes_pls_golite062009
ATPase activity, coupled to movement of substances 2.57054427875021 bayes_pls_golite062009
active transmembrane transporter activity 2.50494515048649 bayes_pls_golite062009
ATPase activity, coupled 2.43862163407966 bayes_pls_golite062009
inorganic cation transmembrane transporter activity 2.40292717311506 bayes_pls_golite062009
ATPase activity 2.39535714892224 bayes_pls_golite062009
motor activity 2.32425703346903 bayes_pls_golite062009
metal ion transmembrane transporter activity 2.26365379756656 bayes_pls_golite062009
microtubule motor activity 2.26003723459523 bayes_pls_golite062009
voltage-gated cation channel activity 2.25549793169956 bayes_pls_golite062009
nucleic acid binding 2.21184938313192 bayes_pls_golite062009
potassium channel activity 2.13753695255922 bayes_pls_golite062009
voltage-gated channel activity 2.12934856066741 bayes_pls_golite062009
voltage-gated ion channel activity 2.12650125678637 bayes_pls_golite062009
G-protein-coupled receptor binding 2.06898720161422 bayes_pls_golite062009
DNA binding 1.94055378599526 bayes_pls_golite062009
substrate-specific transporter activity 1.91091452720653 bayes_pls_golite062009
guanyl nucleotide binding 1.89320355239381 bayes_pls_golite062009
guanyl ribonucleotide binding 1.88721318481223 bayes_pls_golite062009
GTP binding 1.87900088157196 bayes_pls_golite062009
purine ribonucleotide binding 1.85943679361938 bayes_pls_golite062009
ribonucleotide binding 1.85937484083653 bayes_pls_golite062009
purine nucleotide binding 1.8521191028835 bayes_pls_golite062009
nucleotide binding 1.84603132945448 bayes_pls_golite062009
transcription regulator activity 1.83584389083042 bayes_pls_golite062009
kinase activity 1.80889641165674 bayes_pls_golite062009
G-protein coupled receptor activity 1.63949223587737 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 1.60386625568858 bayes_pls_golite062009
ATP binding 1.5859264197035 bayes_pls_golite062009
hydrolase activity 1.57549510726226 bayes_pls_golite062009
adenyl ribonucleotide binding 1.55520429131224 bayes_pls_golite062009
adenyl nucleotide binding 1.53158018507951 bayes_pls_golite062009
peptide antigen binding 1.42242704499429 bayes_pls_golite062009
intracellular ligand-gated ion channel activity 1.39287418273886 bayes_pls_golite062009
ATPase activity, coupled to transmembrane movement of ions 1.23799860254751 bayes_pls_golite062009
protein binding 1.22129154759482 bayes_pls_golite062009
actin filament binding 1.15038324907212 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 1.14475274823167 bayes_pls_golite062009
protein kinase activity 1.12864835254143 bayes_pls_golite062009
catalytic activity 1.00104173493322 bayes_pls_golite062009
cation channel activity 0.997064416395892 bayes_pls_golite062009
transferase activity 0.871779313294914 bayes_pls_golite062009
di-, tri-valent inorganic cation transmembrane transporter activity 0.767424210804186 bayes_pls_golite062009
microfilament motor activity 0.723407201613229 bayes_pls_golite062009
inorganic anion transmembrane transporter activity 0.69784475011795 bayes_pls_golite062009
transcription factor activity 0.697256579145077 bayes_pls_golite062009
signal transducer activity 0.683309012097319 bayes_pls_golite062009
molecular transducer activity 0.683309012097319 bayes_pls_golite062009
transmembrane receptor activity 0.661834961742057 bayes_pls_golite062009
calcium channel activity 0.636216614902039 bayes_pls_golite062009
receptor activity 0.633514002718998 bayes_pls_golite062009
helicase activity 0.6191010101321 bayes_pls_golite062009
cell surface binding 0.618263399939881 bayes_pls_golite062009
sterol transporter activity 0.57614280790431 bayes_pls_golite062009
cytoskeletal protein binding 0.568484017802328 bayes_pls_golite062009
actin binding 0.563996324417607 bayes_pls_golite062009
anion transmembrane-transporting ATPase activity 0.563503770238611 bayes_pls_golite062009
anion transmembrane transporter activity 0.43332053110728 bayes_pls_golite062009
drug transmembrane transporter activity 0.38711726712063 bayes_pls_golite062009
RNA helicase activity 0.34746349346164 bayes_pls_golite062009
protein serine/threonine kinase activity 0.345873656782869 bayes_pls_golite062009
tubulin binding 0.326239364039846 bayes_pls_golite062009
ATP-dependent RNA helicase activity 0.30832907234141 bayes_pls_golite062009
gated channel activity 0.299411774392227 bayes_pls_golite062009
ATP-dependent helicase activity 0.29664013896754 bayes_pls_golite062009
purine NTP-dependent helicase activity 0.29664013896754 bayes_pls_golite062009
RNA-dependent ATPase activity 0.29532978396745 bayes_pls_golite062009
transition metal ion transmembrane transporter activity 0.248918847596573 bayes_pls_golite062009
microtubule binding 0.225323885896927 bayes_pls_golite062009
proton-transporting ATPase activity, rotational mechanism 0.219473333671469 bayes_pls_golite062009
metabotropic serotonin receptor binding 0.178039386254807 bayes_pls_golite062009
ion channel activity 0.154779598791225 bayes_pls_golite062009
photoreceptor activity 0.147646851912797 bayes_pls_golite062009
channel activity 0.134817721656507 bayes_pls_golite062009
passive transmembrane transporter activity 0.134817721656507 bayes_pls_golite062009
substrate-specific channel activity 0.126911677161968 bayes_pls_golite062009
nucleobase, nucleoside, nucleotide kinase activity 0.12351419478929 bayes_pls_golite062009
protein transporter activity 0.104820191623932 bayes_pls_golite062009
voltage-gated calcium channel activity 0.0789800146503108 bayes_pls_golite062009
signal recognition particle binding 0.0628413418878506 bayes_pls_golite062009
inositol hexakisphosphate binding 0.0574403090687272 bayes_pls_golite062009
cation-transporting ATPase activity 0.0536898657672154 bayes_pls_golite062009
G-protein coupled photoreceptor activity 0.0418235454930993 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle