From Publication: | Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3. |
Notes: | This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Mus81. The topolgies of protein complexes in this experiment are unknown. |
Complex Size: | 12 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
non-membrane-bounded organelle | 7.9037E-5 | 12 | 959 | 8 | 6292 |
intracellular non-membrane-bounded organelle | 7.9037E-5 | 12 | 959 | 8 | 6292 |
nuclear nucleosome | 2.1777E-4 | 12 | 12 | 2 | 6292 |
nucleosome | 2.1777E-4 | 12 | 12 | 2 | 6292 |
nuclear chromatin | 3.0582E-4 | 12 | 73 | 3 | 6292 |
chromatin | 3.5814E-4 | 12 | 77 | 3 | 6292 |
nucleus | 4.1872E-4 | 12 | 2041 | 10 | 6292 |
organelle lumen | 6.9054E-4 | 12 | 660 | 6 | 6292 |
intracellular organelle lumen | 6.9054E-4 | 12 | 660 | 6 | 6292 |
membrane-enclosed lumen | 9.4976E-4 | 12 | 700 | 6 | 6292 |
chromosome | 1.3197E-3 | 12 | 274 | 4 | 6292 |
membrane-bounded organelle | 2.1329E-3 | 12 | 3771 | 12 | 6292 |
intracellular membrane-bounded organelle | 2.1329E-3 | 12 | 3771 | 12 | 6292 |
histone acetyltransferase complex | 3.0173E-3 | 12 | 44 | 2 | 6292 |
mitochondrial chromosome | 3.811E-3 | 12 | 2 | 1 | 6292 |
cytoplasmic chromosome | 3.811E-3 | 12 | 2 | 1 | 6292 |
replication fork protection complex | 3.811E-3 | 12 | 2 | 1 | 6292 |
nuclear chromosome part | 4.8752E-3 | 12 | 190 | 3 | 6292 |
protein-DNA complex | 5.0209E-3 | 12 | 57 | 2 | 6292 |
intracellular organelle | 5.3355E-3 | 12 | 4070 | 12 | 6292 |
organelle | 5.3513E-3 | 12 | 4071 | 12 | 6292 |
transcription factor TFIIF complex | 5.7116E-3 | 12 | 3 | 1 | 6292 |
Holliday junction resolvase complex | 5.7116E-3 | 12 | 3 | 1 | 6292 |
intracellular organelle part | 7.3047E-3 | 12 | 2282 | 9 | 6292 |
organelle part | 7.3047E-3 | 12 | 2282 | 9 | 6292 |
transcription export complex | 7.6087E-3 | 12 | 4 | 1 | 6292 |
nuclear chromosome | 8.1053E-3 | 12 | 228 | 3 | 6292 |
nuclear lumen | 8.2402E-3 | 12 | 453 | 4 | 6292 |
chromosomal part | 9.0195E-3 | 12 | 237 | 3 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
nucleic acid metabolic process | 1.3186E-3 | 12 | 1415 | 8 | 6292 |
histone H3-K79 methylation | 1.9072E-3 | 12 | 1 | 1 | 6292 |
nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | 2.6723E-3 | 12 | 1566 | 8 | 6292 |
DNA metabolic process | 3.1073E-3 | 12 | 585 | 5 | 6292 |
histone lysine methylation | 3.811E-3 | 12 | 2 | 1 | 6292 |
DNA repair | 5.0207E-3 | 12 | 192 | 3 | 6292 |
DNA conformation change | 5.1947E-3 | 12 | 58 | 2 | 6292 |
cellular nitrogen compound metabolic process | 6.1479E-3 | 12 | 1770 | 8 | 6292 |
nitrogen compound metabolic process | 6.653E-3 | 12 | 1791 | 8 | 6292 |
response to DNA damage stimulus | 8.915E-3 | 12 | 236 | 3 | 6292 |
macromolecule metabolic process | 9.0889E-3 | 12 | 2349 | 9 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
GO Term |
P-value |
A |
B |
I |
T |
nucleic acid binding | 7.2534E-4 | 12 | 666 | 6 | 6292 |
X-Pro aminopeptidase activity | 3.811E-3 | 12 | 2 | 1 | 6292 |
crossover junction endodeoxyribonuclease activity | 5.7116E-3 | 12 | 3 | 1 | 6292 |
endodeoxyribonuclease activity, producing 3'-phosphomonoesters | 7.6087E-3 | 12 | 4 | 1 | 6292 |