YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Protein Complex Details

Complex Overview

From Publication: Ho Y. et al. (2002) Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Nature. 2002 Jan 10;415(6868):180-3.
Notes: This molecular complex record represents a population of complexes co-purified by immunoprecipitation of FLAG-tagged Nta1. The topolgies of protein complexes in this experiment are unknown.
Complex Size: 8 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

proton-transporting V-type ATPase, V1 domain 3.9462E-5 8 8 2 6292
vacuolar proton-transporting V-type ATPase, V1 domain 3.9462E-5 8 8 2 6292
proton-transporting two-sector ATPase complex, catalytic domain 1.0958E-4 8 13 2 6292
proton-transporting V-type ATPase complex 1.4733E-4 8 15 2 6292
vacuolar proton-transporting V-type ATPase complex 1.4733E-4 8 15 2 6292
proton-transporting two-sector ATPase complex 8.2428E-4 8 35 2 6292
mitochondrial matrix 1.0864E-3 8 176 3 6292
mitochondrial lumen 1.0864E-3 8 176 3 6292
fungal-type vacuole membrane 3.6499E-3 8 74 2 6292
cytoplasmic part 7.7532E-3 8 2482 7 6292
vacuolar membrane 8.3409E-3 8 113 2 6292
presequence translocase-associated import motor 8.8705E-3 8 7 1 6292
vacuolar part 9.5206E-3 8 121 2 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

protein refolding 6.3341E-5 8 10 2 6292
pH reduction 3.8504E-4 8 24 2 6292
intracellular pH reduction 3.8504E-4 8 24 2 6292
vacuolar acidification 3.8504E-4 8 24 2 6292
regulation of cellular pH 4.1826E-4 8 25 2 6292
regulation of intracellular pH 4.1826E-4 8 25 2 6292
regulation of pH 5.646E-4 8 29 2 6292
cellular monovalent inorganic cation homeostasis 7.7767E-4 8 34 2 6292
monovalent inorganic cation homeostasis 9.7204E-4 8 38 2 6292
chaperone-mediated protein folding 1.2715E-3 8 1 1 6292
'de novo' posttranslational protein folding 1.2715E-3 8 1 1 6292
chaperone mediated protein folding requiring cofactor 1.2715E-3 8 1 1 6292
protein localization in mitochondrion 1.8872E-3 8 53 2 6292
protein targeting to mitochondrion 1.8872E-3 8 53 2 6292
mitochondrial transport 2.9134E-3 8 66 2 6292
protein folding 4.0477E-3 8 78 2 6292
malate metabolic process 5.0773E-3 8 4 1 6292
cellular cation homeostasis 7.2337E-3 8 105 2 6292
intron homing 7.6075E-3 8 6 1 6292
protein import 7.6403E-3 8 108 2 6292
cation homeostasis 7.7782E-3 8 109 2 6292
cellular chemical homeostasis 9.219E-3 8 119 2 6292
cellular ion homeostasis 9.219E-3 8 119 2 6292
cellular homeostasis 9.3692E-3 8 120 2 6292
chemical homeostasis 9.8267E-3 8 123 2 6292
ion homeostasis 9.8267E-3 8 123 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

proton-transporting ATPase activity, rotational mechanism 1.0958E-4 8 13 2 6292
cation-transporting ATPase activity 1.6826E-4 8 16 2 6292
ATPase activity, coupled to transmembrane movement of ions 5.646E-4 8 29 2 6292
hydrolase activity, acting on acid anhydrides 5.6934E-4 8 353 4 6292
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 5.6934E-4 8 353 4 6292
pyrophosphatase activity 5.6934E-4 8 353 4 6292
ATPase activity, coupled 6.6794E-4 8 149 3 6292
protein N-terminal asparagine amidohydrolase activity 1.2715E-3 8 1 1 6292
ATPase activity 1.8378E-3 8 211 3 6292
hydrogen ion transmembrane transporter activity 1.9586E-3 8 54 2 6292
primary active transmembrane transporter activity 2.0312E-3 8 55 2 6292
P-P-bond-hydrolysis-driven transmembrane transporter activity 2.0312E-3 8 55 2 6292
ATPase activity, coupled to transmembrane movement of substances 2.0312E-3 8 55 2 6292
hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances 2.0312E-3 8 55 2 6292
monovalent inorganic cation transmembrane transporter activity 2.3343E-3 8 59 2 6292
ATPase activity, coupled to movement of substances 2.3343E-3 8 59 2 6292
hydrolase activity 2.4085E-3 8 911 5 6292
inorganic diphosphatase activity 2.5415E-3 8 2 1 6292
asparaginase activity 3.8101E-3 8 3 1 6292
L-malate dehydrogenase activity 5.0773E-3 8 4 1 6292
malate dehydrogenase activity 6.3431E-3 8 5 1 6292
nucleoside-triphosphatase activity 6.5162E-3 8 329 3 6292
inorganic cation transmembrane transporter activity 6.7076E-3 8 101 2 6292
cation transmembrane transporter activity 9.0698E-3 8 118 2 6292
active transmembrane transporter activity 9.5206E-3 8 121 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle