| From Publication: | Riffle <i>et al</i>. (2010) (Unpublished Data) |
| Notes: | Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7 |
| Complex Size: | 3 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| holo TFIIH complex | 2.8918E-9 | 3 | 10 | 3 | 6292 |
| DNA-directed RNA polymerase II, holoenzyme | 6.6801E-7 | 3 | 56 | 3 | 6292 |
| transcription factor complex | 1.3774E-6 | 3 | 71 | 3 | 6292 |
| nucleoplasm part | 5.8345E-5 | 3 | 245 | 3 | 6292 |
| nucleoplasm | 7.3064E-5 | 3 | 264 | 3 | 6292 |
| nuclear lumen | 3.709E-4 | 3 | 453 | 3 | 6292 |
| organelle lumen | 1.1495E-3 | 3 | 660 | 3 | 6292 |
| intracellular organelle lumen | 1.1495E-3 | 3 | 660 | 3 | 6292 |
| membrane-enclosed lumen | 1.3717E-3 | 3 | 700 | 3 | 6292 |
| nucleotide-excision repair factor 3 complex | 3.3344E-3 | 3 | 7 | 1 | 6292 |
| nuclear part | 5.3751E-3 | 3 | 1103 | 3 | 6292 |
| protein complex | 5.8881E-3 | 3 | 1137 | 3 | 6292 |
| nucleotide-excision repair complex | 9.9809E-3 | 3 | 21 | 1 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| general RNA polymerase II transcription factor activity | 1.004E-6 | 3 | 64 | 3 | 6292 |
| RNA polymerase II transcription factor activity | 8.6215E-6 | 3 | 130 | 3 | 6292 |
| transcription regulator activity | 1.5509E-4 | 3 | 339 | 3 | 6292 |
| protein kinase regulator activity | 1.5615E-4 | 3 | 46 | 2 | 6292 |
| kinase regulator activity | 1.7737E-4 | 3 | 49 | 2 | 6292 |
| RNA polymerase II carboxy-terminal domain kinase activity | 4.768E-4 | 3 | 1 | 1 | 6292 |
| cyclin-dependent protein kinase activating kinase activity | 9.5344E-4 | 3 | 2 | 1 | 6292 |
| enzyme regulator activity | 3.1616E-3 | 3 | 207 | 2 | 6292 |
| cyclin-dependent protein kinase activity | 3.8101E-3 | 3 | 8 | 1 | 6292 |
| protein kinase activator activity | 4.2857E-3 | 3 | 9 | 1 | 6292 |
| kinase activator activity | 4.7611E-3 | 3 | 10 | 1 | 6292 |