| General Information: |
|
| Name(s) found: |
TRL1 /
YJL087C
[SGD]
|
| Description(s) found:
Found 29 descriptions. SHOW ALL |
|
| Organism: | Saccharomyces cerevisiae |
| Length: | 827 amino acids |
Gene Ontology: |
|
| Cellular Component: |
nuclear inner membrane
[IDA ]
nucleoplasm [IDA ]
|
| Biological Process: |
UFP-specific transcription factor mRNA processing during unfolded protein response
[TAS]
tRNA splicing, via endonucleolytic cleavage and ligation [IDA ][IMP]
|
| Molecular Function: |
GTP-dependent polyribonucleotide 5'-hydroxyl-kinase activity
[IDA]
2',3'-cyclic-nucleotide 3'-phosphodiesterase activity [IDA ]
RNA ligase (ATP) activity [IDA ]
|
| Sequence: |
|
| Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51
| | | | | |
1 MPSPYDGKRT VTQLVNELEK AEKLSGRGRA YRRVCDLSHS NKKVISWKFN EWDYGKNTIT 60
61 LPCNARGLFI SDDTTNPVIV ARGYDKFFNV GEVNFTKWNW IEENCTGPYD VTIKANGCII 120
121 FISGLEDGTL VVCSKHSTGP RADVDRNHAE AGEKQLLRQL AAMNINRSDF ARMLYTHNVT 180
181 AVAEYCDDSF EEHILEYPLE KAGLYLHGVN VNKAEFETWD MKDVSQMASK YGFRCVQCIT 240
241 SNTLEDLKKF LDNCSATGSF EGQEIEGFVI RCHLKSTEKP FFFKYKFEEP YLMYRQWREV 300
301 TKDYISNKSR VFKFRKHKFI TNKYLDFAIP ILESSPKICE NYLKGFGVIE LRNKFLQSYG 360
361 MSGLEILNHE KVAELELKNA IDYDKVDERT KFLIFPISVI GCGKTTTSQT LVNLFPDSWG 420
421 HIQNDDITGK DKSQLMKKSL ELLSKKEIKC VIVDRNNHQF RERKQLFEWL NELKEDYLVY 480
481 DTNIKVIGVS FAPYDKLSEI RDITLQRVIK RGNNHQSIKW DELGEKKVVG IMNGFLKRYQ 540
541 PVNLDKSPDN MFDLMIELDF GQADSSLTNA KQILNEIHKA YPILVPEIPK DDEIETAFRR 600
601 SLDYKPTVRK IVGKGNNNQQ KTPKLIKPTY ISAKIENYDE IIELVKRCIA SDAELTEKFK 660
661 HLLASGKVQK ELHITLGHVM SSREKEAKKL WKSYCNRYTD QITEYNNNRI ENAQGSGNNQ 720
721 NTQVKTTDKL NFRLEKLCWD EKIIAIVVEL SKDKDGCIID ENNEKIKGLC CQNKIPHITL 780
781 CKLESGVKAV YSNVLCEKVE SAEVDENIKV VKLDNSKEFV GSVYLNF |
| PUBLICATION | TOPOLOGY | COCOMPLEXED PROTEINS | |
| View Details | (MIPS) Mewes HW, et al. (2004) |
|
LOS1 SEN15 SEN2 SEN34 SEN54 STP1 STP2 STP3 STP4 TPT1 TRL1 |
| View Details | Krogan NJ, et al. (2006) |
|
SAG1 TRL1 YJR124C YPL141C |
| View Details | Ho Y, et al. (2002) |
|
ADH2 CIC1 CKA1 CKA2 CKB1 CKB2 COP1 DBP10 DSS1 ENP2 GDE1 HHF1, HHF2 HOT1 KRI1 MAM33 MRPL1 NOC3 NOP12 NOP2 NOP7 PDI1 POB3 POL2 PUF6 PWP1 RRP14 RRP5 SFP1 SLD2 SPT16 SRP1 SSF1 TIF4631 TRL1 UTP22 VMR1 VPS73 WTM2 YRA1 |
| View Details | Qiu et al. (2008) |
|
SEN15 SEN2 SEN34 SEN54 TRL1 |
The following runs contain data for this protein:
| BAIT | COMMENTS | PUBLICATION | |
| View Run | #20 Asynchronous Prep1-TiO2 Phosphopeptide enrichment, PartB | Keck JM, et al. (2011) |
SHOWING SINGLE HITS. [ Hide Single Hits ]
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| PROTEIN(S) | PUBLICATION | |
| View Data |
|
Huh WK, et al. (2003) |
Domains predicted:
| # | Region(s) | Method | Confidence | Match Description | |
| 1 | View Details | [1..307] |  |
1.004919 | View MSA. No confident structure predictions are available. |
| 2 | View Details | [308..827] | |
N/A | No confident structure predictions are available. |
| Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
| Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)