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Protein Overview: TFB3

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run MLP2 #12 Mitotic Prep1-TiO2 Flowthrough Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

  BAIT PREY HITS PUBLICATION
View Screen MEC3 TFB3 2 Unpublished Fields Lab Data

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data TFB3 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..67] PSI-BLAST 127.035458 TFIIH Mat1 subunit
2 View Details [68..264] PSI-BLAST 5.0 Heavy meromyosin subfragment
3 View Details [265..321] deduced N/A Confident ab initio structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • general RNA polymerase II transcription factor activity
  • 6.51043144330453 bayes_pls_golite062009
  • ubiquitin-protein ligase activity
  • 5.97121728620188 bayes_pls_golite062009
  • small conjugating protein ligase activity
  • 5.78935175140238 bayes_pls_golite062009
  • acid-amino acid ligase activity
  • 4.75377804653841 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
  • 3.82459130917693 bayes_pls_golite062009
  • binding
  • 2.78710909602478 bayes_pls_golite062009
  • transcription regulator activity
  • 2.72498741013971 bayes_pls_golite062009
  • nucleic acid binding
  • 2.32387297115017 bayes_pls_golite062009
  • DNA binding
  • 2.00904221080834 bayes_pls_golite062009
  • transcription repressor activity
  • 1.98209395225978 bayes_pls_golite062009
  • protein binding
  • 1.5975811408548 bayes_pls_golite062009
  • transcription factor activity
  • 1.22579085356684 bayes_pls_golite062009
  • small conjugating protein-specific protease activity
  • 1.2126425713931 bayes_pls_golite062009
  • transcription factor binding
  • 1.11842175076436 bayes_pls_golite062009
  • ubiquitin-specific protease activity
  • 1.03469202541773 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 0.90321253993065 bayes_pls_golite062009
  • ligase activity
  • 0.63517530468004 bayes_pls_golite062009
  • cysteine-type peptidase activity
  • 0.50197530717959 bayes_pls_golite062009
  • transcription corepressor activity
  • 0.384990496120483 bayes_pls_golite062009
  • ubiquitin thiolesterase activity
  • 0.265769062717221 bayes_pls_golite062009
  • transcription coactivator activity
  • 0.255669498391574 bayes_pls_golite062009
  • transcription cofactor activity
  • 0.233838999434784 bayes_pls_golite062009
  • catalytic activity
  • 0.14112008370434 bayes_pls_golite062009
  • transcription activator activity
  • 0.126093965701234 bayes_pls_golite062009
  • enzyme binding
  • 0.104373352314595 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle