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Protein Overview: RAD3

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run RPA135 No Comments Schneider, DA, et al. (2006)
View Run MLP2 #21 Asynchronous Prep2-IMAC Phosphopeptide enrichment A1 Keck JM, et al. (2011)
View Run MLP2 #03 Alpha Factor Prep1-TiO2 Flowthrough Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

  BAIT PREY HITS PUBLICATION
View Screen CHK1 RAD3 2 Unpublished Fields Lab Data

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data RAD3 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..221] PSI-BLAST 39.0 Putative DEAD box RNA helicase
2 View Details [222..389] PSI-BLAST 39.0 Putative DEAD box RNA helicase
3 View Details [390..441] deduced N/A No confident structure predictions are available.
4 View Details [442..725] ORFEUS 9.08 Initiation factor 4a
5 View Details [726..778] deduced N/A No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • general RNA polymerase II transcription factor activity
  • 5.47805400577115 bayes_pls_golite062009
  • dATP binding
  • 3.90236137621968 bayes_pls_golite062009
  • adenyl deoxyribonucleotide binding
  • 2.90098016780049 bayes_pls_golite062009
  • purine deoxyribonucleotide binding
  • 2.90098016780049 bayes_pls_golite062009
  • DNA-dependent ATPase activity
  • 2.72462789867829 bayes_pls_golite062009
  • deoxyribonuclease activity
  • 2.72222787956584 bayes_pls_golite062009
  • binding
  • 2.64537357529343 bayes_pls_golite062009
  • endodeoxyribonuclease activity
  • 2.60873257753475 bayes_pls_golite062009
  • hydrolase activity
  • 2.55157966585974 bayes_pls_golite062009
  • nucleic acid binding
  • 2.51683451033161 bayes_pls_golite062009
  • DNA helicase activity
  • 2.2817164193758 bayes_pls_golite062009
  • pyrophosphatase activity
  • 2.13284212711072 bayes_pls_golite062009
  • DNA binding
  • 2.12258000781149 bayes_pls_golite062009
  • transcription regulator activity
  • 2.09345198747025 bayes_pls_golite062009
  • endonuclease activity
  • 1.96689197136388 bayes_pls_golite062009
  • ATP-dependent DNA helicase activity
  • 1.88455339138556 bayes_pls_golite062009
  • helicase activity
  • 1.70242731830224 bayes_pls_golite062009
  • microtubule motor activity
  • 1.6537049553461 bayes_pls_golite062009
  • RNA helicase activity
  • 1.63960194106079 bayes_pls_golite062009
  • ATP-dependent RNA helicase activity
  • 1.61735400124552 bayes_pls_golite062009
  • RNA-dependent ATPase activity
  • 1.60404584546501 bayes_pls_golite062009
  • protein-DNA loading ATPase activity
  • 1.29640539057136 bayes_pls_golite062009
  • structure-specific DNA binding
  • 1.2539059700735 bayes_pls_golite062009
  • protein binding
  • 1.22129154759482 bayes_pls_golite062009
  • purine NTP-dependent helicase activity
  • 1.19311444180077 bayes_pls_golite062009
  • ATP-dependent helicase activity
  • 1.19311444180077 bayes_pls_golite062009
  • motor activity
  • 1.14667913749579 bayes_pls_golite062009
  • DNA clamp loader activity
  • 1.12431517057397 bayes_pls_golite062009
  • double-stranded DNA binding
  • 1.117585097627 bayes_pls_golite062009
  • transcription elongation regulator activity
  • 1.11383295816593 bayes_pls_golite062009
  • catalytic activity
  • 1.00104173493322 bayes_pls_golite062009
  • transcription activator activity
  • 0.889929694023098 bayes_pls_golite062009
  • transcription factor activity
  • 0.887108427603557 bayes_pls_golite062009
  • ion transmembrane transporter activity
  • 0.595694294246159 bayes_pls_golite062009
  • single-stranded DNA binding
  • 0.568457189190858 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 0.543891899378373 bayes_pls_golite062009
  • cytoskeletal protein binding
  • 0.500462538667228 bayes_pls_golite062009
  • cation transmembrane transporter activity
  • 0.394186699348086 bayes_pls_golite062009
  • purine nucleotide binding
  • 0.360529478474946 bayes_pls_golite062009
  • nucleotide binding
  • 0.354857598792381 bayes_pls_golite062009
  • purine ribonucleotide binding
  • 0.35235724478784 bayes_pls_golite062009
  • ribonucleotide binding
  • 0.352298062690593 bayes_pls_golite062009
  • mismatched DNA binding
  • 0.31144582840038 bayes_pls_golite062009
  • DNA strand annealing activity
  • 0.283577486331079 bayes_pls_golite062009
  • four-way junction helicase activity
  • 0.26252931460003 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 0.243902356228423 bayes_pls_golite062009
  • exodeoxyribonuclease V activity
  • 0.185603938981231 bayes_pls_golite062009
  • nucleotidyltransferase activity
  • 0.181509771587324 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
  • 0.147579541298736 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
  • 0.113504049290503 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
  • 0.111293884322157 bayes_pls_golite062009
  • structural constituent of ribosome
  • 0.089234257580272 bayes_pls_golite062009
  • actin binding
  • 0.00482938540552702 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle