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Protein Overview: TRP5

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run MLP2 #25 Asynchronous Prep3-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #24 Asynchronous Prep3-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)
View Run MLP2 #12 Mitotic Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #30 Asynchronous Prep6-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

  BAIT PREY HITS PUBLICATION
View Screen PDI1 TRP5 1 Unpublished Fields Lab Data

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data TRP5 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..280] PSI-BLAST 467.450636 Trp synthase alpha-subunit
2 View Details [281..350]
[384..501]
PSI-BLAST 1276.0 Tryptophan synthase, beta-subunit
3 View Details [351..383]
[502..707]
PSI-BLAST 1276.0 Tryptophan synthase, beta-subunit

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2
Term Confidence Notes
  • tryptophan synthase activity
  • 3.62092042588636 bayes_pls_golite062009
  • catalytic activity
  • 2.38994231321972 bayes_pls_golite062009
  • lyase activity
  • 1.87743897464083 bayes_pls_golite062009
  • carbon-oxygen lyase activity, acting on phosphates
  • 1.42195744285403 bayes_pls_golite062009
  • binding
  • 1.34539784687114 bayes_pls_golite062009
  • cysteine synthase activity
  • 1.31641967296632 bayes_pls_golite062009
  • carbon-oxygen lyase activity
  • 0.923824749425553 bayes_pls_golite062009
  • threonine synthase activity
  • 0.727838845253199 bayes_pls_golite062009
  • ammonia-lyase activity
  • 0.476674617721478 bayes_pls_golite062009
  • L-threonine ammonia-lyase activity
  • 0.37325071016009 bayes_pls_golite062009
  • carbon-nitrogen lyase activity
  • 0.249761226675912 bayes_pls_golite062009
  • protein binding
  • 0.044015703839169 bayes_pls_golite062009
    3 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle