Protein Overview: ATC1

General Information:
Name(s) found:	ATC1 / YDR184C [SGD]
Description(s) found: SHOW ONLY BEST	gi\|74627196\|sp\|Q04005.1\|LIC4_YEAST RecName: Full=Protein ATC1/LIC4; AltName: Full=AIP3 complex protein 1; AltName: Full=Lithium comvertas protein 4 [NCBI NR] gi\|6320390\|ref\|NP_010470.1\| Nuclear protein, possibly involved in regulation of cation stress responses and/or in the establishment of bipolar budding pattern; Atc1p [Saccharomyces cerevisiae] [NCBI NR] gi\|1289301\|emb\|CAA86691.1\| unknown [Saccharomyces cerevisiae] [NCBI NR] pir\|\|S49781 hypothetical protein YDR184c - yeast (Saccharomyces cerevisiae) [NCBI NR] Protein ATC1/LIC4 OS=Saccharomyces cerevisiae GN=ATC1 PE=1 SV=1 [Swiss-Prot] ATC1 Binds Aip3p [mips] Nuclear protein, possibly involved in regulation of cation stress responses and/or in the establishment of bipolar budding pattern [SGD] ATC1, Chr IV from 830621-831505, reverse complement [yeast_orfs2] Chr IV from 830621-831505, reverse complement [yeastorf3.fasta] Chr IV from 831505-830621, reverse complement [yeastorf5.fasta] >Q04005 (Q04005) Hypothetical protein [4932.FASTACCERV.txt] ATC1 SGDID:S0002592, Chr IV from 831506-830622, reverse complement, Verified ORF [yeastflysequest.fasta] ATC1 SGDID:S0002592, Chr IV from 831508-830624, reverse complement, Verified ORF [10112005cervSGD.fasta] Atc1p [Saccharomyces cerevisiae]gi\|1289301\|emb\|CAA86691.1\| unknown [Saccharomyces cerevisiae]gi\|1077220\|pir\|\|S49781 hypothetical protein YDR184c - yeast (Saccharomyces cerevisiae) [nrdb_11152004_Chlamydomonas] (Q04005) Hypothetical protein [cerv4932.FASTAC] ATC1 SGDID:S000002592, Chr IV from 831508-830624, reverse complement, Verified ORF, "Nuclear protein, possibly involved in regulation of cation stress responses and/or in the establishment of bipolar budding pattern" [SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta] ATC1 SGDID:S000002592, Chr IV from 831510-830626, reverse complement, Verified ORF, "Nuclear protein, possibly involved in regulation of cation stress responses and/or in the establishment of bipolar budding pattern" [yeast-contam.fasta] ATC1 SGDID:S000002592, Chr IV from 831511-830627, reverse complement, Verified ORF, "Nuclear protein, possibly involved in regulation of cation stress responses and/or in the establishment of bipolar budding pattern" [SGD_S-cerevisiae_na_08-19-2008_con_reversed.fasta] unknown [Saccharomyces cerevisiae] [nr-271106-contam.fasta] Nuclear protein, possibly involved in regulation of cation stress responses and/or in the establishment of bipolar budding pattern; Atc1p [Saccharomyces cerevisiae] [nr-271106-contam.fasta] Protein ATC1/LIC4 (AIP3 complex protein 1) (Lithium comvertas protein 4) [nr-271106-contam.fasta] [chemostatdb.fasta] Protein ATC1/LIC4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ATC1 PE=1 SV=1 [UniProt_S_cerevisiae_20120516_05-16-2012_reversed.fasta] ATC1 SGDID:S000002592, Chr IV from 831513-830629, Genome Release 64-1-1, reverse complement, Verified ORF, "Nuclear protein, possibly involved in regulation of cation stress responses and/or in the establishment of bipolar budding pattern" [yeast-030211-contam.fasta] ATC1 SGDID:S000002592, Chr IV from 831513-830629, Genome Release 64-2-1, reverse complement, Verified ORF, "Nuclear protein; possibly involved in regulation of cation stress responses and/or in the establishment of bipolar budding pattern; relative distribution to the nucleus decreases upon DNA replication stress" [20141208_orf_trans.fasta] YDR184C SGDID:S000002592, Chr IV from 831513-830629, Genome Release 64-1-1, reverse complement, Verified ORF, "Nuclear protein, possibly involved in regulation of cation stress responses and/or in the establishment of bipolar budding pattern" [2016-01-SGD_Yeast_Contam_Riffle_20140507-Ska-Hec-110-tubulin.fasta]
Organism:	Saccharomyces cerevisiae
Length:	294 amino acids
Gene Ontology:
Cellular Component:	nucleus [IDA]
Biological Process:	bipolar cellular bud site selection [IGI] telomere maintenance [IMP] ribosome biogenesis [RCA] response to stress [IGI]
Molecular Function:	molecular_function [ND]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTNQSNPNT DLTDDANIEH TLHRLLTQAN NHFDDTVKID GQSLDLGKDL EQVMMDNLDC  60
   61 TDIFDSDIAS QKHLTLESLF NDEHNTDSST LLEMQRSAND SLVGIDLDRH KKGYTGKASL 120
  121 DKSTNQNNVH KPDKEQKNYK IDKPTIKKKK SLLKTTNEPM LSPASLSPSS SLASSDANES 180
  181 HLKIESMITD ITSKIDSARQ DIVSATKPAK FTNEFTISQI SEMKARIINT HKLLLNFNFI 240
  241 KEGYARSCIQ LKKSMDSLKD SEIHRAHLLV ENDDLKQQIL ELTQKLNEKS SKES

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

The following runs contain data for this protein:

	BAIT	COMMENTS	PUBLICATION
View Run	MLP2	#12 Mitotic Prep1-TiO2 Flowthrough	Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

	BAIT	PREY	HITS	PUBLICATION
View Screen	MDM1	ATC1	2	Unpublished Fields Lab Data
View Screen	KAP104	ATC1	1	Unpublished Fields Lab Data
View Screen	UBC7	ATC1	1	Unpublished Fields Lab Data
View Screen	ATG12	ATC1	1	Unpublished Fields Lab Data
View Screen	IOC4	ATC1	1	Unpublished Fields Lab Data
View Screen	ATG20	ATC1	1	Unpublished Fields Lab Data
View Screen	SPO1	ATC1	1	Unpublished Fields Lab Data
View Screen	CDC48	ATC1	1	Unpublished Fields Lab Data
View Screen	ELA1	ATC1	1	Unpublished Fields Lab Data
View Screen	RPN5	ATC1	1	Unpublished Fields Lab Data
View Screen	PSF3	ATC1	1	Hazbun TR, et al. (2003)
View Screen	PEX10	ATC1	1	Unpublished Fields Lab Data
View Screen	RIO1	ATC1	1	Unpublished Fields Lab Data
View Screen	YDR413C	ATC1	1	Unpublished Fields Lab Data
View Screen	VPS17	ATC1	1	Unpublished Fields Lab Data
View Screen	YER156C	ATC1	1	Unpublished Fields Lab Data
View Screen	APC5	ATC1	1	Unpublished Fields Lab Data
View Screen	UBP6	ATC1	1	Unpublished Fields Lab Data
View Screen	TPK2	ATC1	1	Unpublished Fields Lab Data
View Screen	BRP1	ATC1	1	Unpublished Fields Lab Data
View Screen	VIK1	ATC1	1	Unpublished Fields Lab Data
View Screen	CDC16	ATC1	1	Unpublished Fields Lab Data
View Screen	MRPL51	ATC1	1	Unpublished Fields Lab Data
View Screen	STE3	ATC1	1	Unpublished Fields Lab Data
View Screen	PEX13	ATC1	1	Unpublished Fields Lab Data
View Screen	YLR224W	ATC1	1	Unpublished Fields Lab Data
View Screen	REH1	ATC1	1	Unpublished Fields Lab Data
View Screen	RRN10	ATC1	1	Unpublished Fields Lab Data

Microscopy / Localization Data

New Feature: Upload Your Own Microscopy Data

	PROTEIN(S)	PUBLICATION
View Data	ATC1	Huh WK, et al. (2003)

Protein Structure Data

[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..131]	deduced	N/A	No confident structure predictions are available.
2	View Details	[132..294]	MSA	1.002951	View MSA. No confident structure predictions are available.

Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2