| General Information: |
|
| Name(s) found: |
VPS17 /
YOR132W
[SGD]
|
| Description(s) found:
Found 28 descriptions. SHOW ALL |
|
| Organism: | Saccharomyces cerevisiae |
| Length: | 551 amino acids |
Gene Ontology: |
|
| Cellular Component: |
endosome
[IPI ]
retromer complex [IPI ]
|
| Biological Process: |
retrograde transport, endosome to Golgi
[IPI]
|
| Molecular Function: |
protein transporter activity
[IMP][IPI]
phosphatidylinositol-3-phosphate binding [IDA ]
|
| Sequence: |
|
| Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51
| | | | | |
1 MTSAVPYDPY DDLDNNPFAE PQEEDSEPAA TTTDGSSSMS EERVGTEQTA ASVQDNGTAN 60
61 NIQNGLGEEG NATRSKTSNE HNENQQPSQP SERVILPERS DEKKKYTLLA KVTGLERFGS 120
121 ATGKKENPTI IFDCSTNLPT FRKQQYKNVK KSYEEFHQLF KYLNVAIQES FVPTLPSAYT 180
181 TFGINSEEDR MKVTRNFQLW FNRLSQDPLI IRNEEVAFFI ESDFNTYTPI NKSKSLASGL 240
241 KRKTLKQLAP PYDEITELAE FRPLVKSIYV VSQSLQEKLL RVSRNRKMMV QEENAFGQDF 300
301 VNLDEHNKLY RRYGKILTAV GDIDSIIATM DMATLYDGLE WIVRDAYAVK EALTNRHFIM 360
361 RNLVQAQQNS KAKQEQARRF RSRRDINPMK IDEALRQLKA AAKNEQVLTL KLQRITSNMI 420
421 IERKQWISWY EEWIRSSIKE FTLRKIEYER KKLTLLERVR SDIRKADENG GLSRLGRHAV 480
481 SNNNSDTSQT LKGDSWTGES NRKSQIPINK IAHTEFDDEL FTEDDGYNSQ DSDTTSLNAR 540
541 HAASLLGMST K |
| PUBLICATION | TOPOLOGY | COCOMPLEXED PROTEINS | |
| View Details | Riffle et al. (2010) (Unpublished Data) |
|
MUK1 VPS17 VPS29 VPS35 VPS5 |
| View Details | (MIPS) Mewes HW, et al. (2004) |
|
VPS17 VPS5 |
| View Details | Krogan NJ, et al. (2006) |
|
MIA40 MUK1 PEP8 VPS17 VPS29 VPS35 VPS5 |
| View Details | Qiu et al. (2008) |
|
ATG20 PEP8 PIB2 SNX41 VPS17 VPS29 VPS35 VPS5 |
The following runs contain data for this protein:
| BAIT | COMMENTS | PUBLICATION | |
| View Run | No Comments | Hazbun TR, et al. (2003) | |
| View Run | sample cbf3 from feb 2005 | Sandall S, et all (2006) | |
| View Run | No Comments | Schneider, DA, et al. (2006) | |
| View Run | #12 Mitotic Prep1-TiO2 Flowthrough | Keck JM, et al. (2011) | |
| View Run | #11 Mitotic Prep1-TiO2 enriched, new search criteria | Keck JM, et al. (2011) |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
New Feature: Upload Your Own Microscopy Data
| PROTEIN(S) | PUBLICATION | |
| View Data |
|
Huh WK, et al. (2003) |
| View Data |
|
Huh WK, et al. (2003) |
Domains predicted:
| # | Region(s) | Method | Confidence | Match Description | |
| 1 | View Details | [1..71] |  |
N/A | No confident structure predictions are available. |
| 2 | View Details | [72..237] | |
15.221849 | p40phox NADPH oxidase |
| 3 | View Details | [238..483] | |
2.221849 | Heavy meromyosin subfragment |
| 4 | View Details | [484..551] | |
N/A | No confident structure predictions are available. |
| Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
| Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)