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View Structure Prediction Details

Protein: FKB65_ARATH
Organism: Arabidopsis thaliana
Length: 578 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FKB65_ARATH.

Description E-value Query
Range
Subject
Range
gi|110736036 - gi|110736036|dbj|BAE99990.1| peptidylprolyl isomerase [Arabidopsis thaliana]
394.0 [0..1] [578..1]

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Predicted Domain #1
Region A:
Residues: [1-160]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDDFDTQNQ FPEEEPEEMD MDLPDNDEAD SAPYLKIGEE MEIGKSGLKK KLVKECEKWD  60
   61 TPENGDEVEV HYTGTLLDGT KFDSSRDRGT PFKFTLGQGH VIKGWDLGIK TMKKGENAIF 120
  121 TIPPELAYGE TGSPPTIPPN ATLQFDVELI AWRSVKDICG 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.69897
Match: 1q1cA
Description: Crystal structure of N(1-260) of human FKBP52
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
ryanodine-sensitive calcium-release channel activity 10.9968443145942 bayes_pls_golite062009
intracellular ligand-gated calcium channel activity 10.9968443145942 bayes_pls_golite062009
macrolide binding 7.31599503004442 bayes_pls_golite062009
FK506 binding 7.22442625476031 bayes_pls_golite062009
metal ion transmembrane transporter activity 6.74926751944787 bayes_pls_golite062009
calcium channel activity 6.4374377859142 bayes_pls_golite062009
cation channel activity 6.06732269872248 bayes_pls_golite062009
ion channel activity 5.45007096522107 bayes_pls_golite062009
passive transmembrane transporter activity 5.32426176964634 bayes_pls_golite062009
channel activity 5.32426176964634 bayes_pls_golite062009
substrate-specific channel activity 5.28960420749143 bayes_pls_golite062009
gated channel activity 5.28074654906904 bayes_pls_golite062009
peptidyl-prolyl cis-trans isomerase activity 4.0615867467963 bayes_pls_golite062009
cis-trans isomerase activity 3.99265212272703 bayes_pls_golite062009
ligand-gated channel activity 3.34717828007833 bayes_pls_golite062009
ligand-gated ion channel activity 3.34717828007833 bayes_pls_golite062009
ion transmembrane transporter activity 2.6566793500337 bayes_pls_golite062009
cation transmembrane transporter activity 2.61794461605199 bayes_pls_golite062009
calcium-release channel activity 2.58969194870156 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 2.47257819150887 bayes_pls_golite062009
isomerase activity 2.31710030777753 bayes_pls_golite062009
transcription regulator activity 1.85589011277711 bayes_pls_golite062009
receptor activity 1.78361575899771 bayes_pls_golite062009
transmembrane receptor activity 1.7459556028988 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 1.68688812199737 bayes_pls_golite062009
kinase activity 1.67904764195462 bayes_pls_golite062009
binding 1.63170667962375 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 1.57898291235576 bayes_pls_golite062009
signal transducer activity 1.53711974553033 bayes_pls_golite062009
molecular transducer activity 1.53711974553033 bayes_pls_golite062009
protein kinase activity 1.45320632553313 bayes_pls_golite062009
drug binding 1.39643621593407 bayes_pls_golite062009
transferase activity 1.34122735969662 bayes_pls_golite062009
receptor serine/threonine kinase binding 1.32709321745178 bayes_pls_golite062009
transmembrane receptor protein serine/threonine kinase binding 1.32470025150272 bayes_pls_golite062009
transforming growth factor beta receptor binding 1.32470025150272 bayes_pls_golite062009
transporter activity 1.25197125648774 bayes_pls_golite062009
protein binding 1.08765413491791 bayes_pls_golite062009
SMAD binding 1.04905381164355 bayes_pls_golite062009
transmembrane transporter activity 1.03909235910355 bayes_pls_golite062009
catalytic activity 0.885282592863018 bayes_pls_golite062009
substrate-specific transporter activity 0.789390402522536 bayes_pls_golite062009
transmembrane receptor protein serine/threonine kinase activity 0.763739321802433 bayes_pls_golite062009
transforming growth factor beta receptor activity 0.763739321802433 bayes_pls_golite062009
intracellular ligand-gated ion channel activity 0.727019445105701 bayes_pls_golite062009
protein serine/threonine kinase activity 0.671059013500415 bayes_pls_golite062009
transmembrane receptor protein kinase activity 0.525950701946406 bayes_pls_golite062009
unfolded protein binding 0.27473817613726 bayes_pls_golite062009
activin binding 0.262691232876501 bayes_pls_golite062009
transcription elongation regulator activity 0.0778721788337902 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [161-578]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DGGVSKKIIV EGEKWEKPKD LDEVYVKYEA RLEDGTIVGK SDGVEFTVKE GHFCPALSKA  60
   61 VKTMKRGEKV LLTVKPQYGF GEFGRPASDG LQAAIPPNAT LQIDLELVSW KTVVEVTDDR 120
  121 KVIKKILKEG EGYERPNEGA IVKLKLIGKL QDGTTVFVKK GHEEDEEPFE FKIDEEQVIE 180
  181 GLEKAVMGMK KGEVALITIS PEYAFGSSES KQELAVIPPN STVYYEVELV SFIKEKESWD 240
  241 MNTQERIEAA GKKKEEGNVL FKAGKYARAS KRYERGVKYI EYDSTFDEEE KKKSKDLKIA 300
  301 CNLNDAACKL KLKDYKEAAK LSTKVLEMDS RNVKAMYRRA HAYLETADLD LAELDIKKAL 360
  361 EIDPDNKEVK IEYKKLKEKV KEYNKKDAKF YSNMLSKMLE PHKGTQKEAQ AMSIDTKA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 51.221849
Match: 1kt0A
Description: FKBP51, C-terminal domain; FKBP51, N-terminal domains
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
intracellular ligand-gated calcium channel activity 10.9968443145942 bayes_pls_golite062009
ryanodine-sensitive calcium-release channel activity 10.9968443145942 bayes_pls_golite062009
macrolide binding 7.31599503004442 bayes_pls_golite062009
FK506 binding 7.22442625476031 bayes_pls_golite062009
metal ion transmembrane transporter activity 6.74926751944787 bayes_pls_golite062009
calcium channel activity 6.4374377859142 bayes_pls_golite062009
cation channel activity 6.06732269872248 bayes_pls_golite062009
protein phosphatase 2A binding 6.03345119957353 bayes_pls_golite062009
ion channel activity 5.45007096522107 bayes_pls_golite062009
channel activity 5.32426176964634 bayes_pls_golite062009
passive transmembrane transporter activity 5.32426176964634 bayes_pls_golite062009
substrate-specific channel activity 5.28960420749143 bayes_pls_golite062009
gated channel activity 5.28074654906904 bayes_pls_golite062009
peptidyl-prolyl cis-trans isomerase activity 4.0615867467963 bayes_pls_golite062009
cis-trans isomerase activity 3.99265212272703 bayes_pls_golite062009
ligand-gated ion channel activity 3.34717828007833 bayes_pls_golite062009
ligand-gated channel activity 3.34717828007833 bayes_pls_golite062009
ion transmembrane transporter activity 2.6566793500337 bayes_pls_golite062009
cation transmembrane transporter activity 2.61794461605199 bayes_pls_golite062009
calcium-release channel activity 2.58969194870156 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 2.47257819150887 bayes_pls_golite062009
phosphatase activity 2.4502869290841 bayes_pls_golite062009
phosphoric ester hydrolase activity 2.38923256228405 bayes_pls_golite062009
ubiquitin-protein ligase activity 2.35894350869919 bayes_pls_golite062009
isomerase activity 2.31710030777753 bayes_pls_golite062009
small conjugating protein ligase activity 2.12083180880718 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 2.07186557005331 bayes_pls_golite062009
transcription regulator activity 1.85589011277711 bayes_pls_golite062009
receptor activity 1.78361575899771 bayes_pls_golite062009
transmembrane receptor activity 1.7459556028988 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 1.68688812199737 bayes_pls_golite062009
kinase activity 1.67904764195462 bayes_pls_golite062009
binding 1.63170667962375 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 1.57898291235576 bayes_pls_golite062009
signal transducer activity 1.53711974553033 bayes_pls_golite062009
molecular transducer activity 1.53711974553033 bayes_pls_golite062009
phosphoprotein phosphatase activity 1.5101001424727 bayes_pls_golite062009
protein kinase activity 1.45320632553313 bayes_pls_golite062009
acid-amino acid ligase activity 1.4415534360016 bayes_pls_golite062009
drug binding 1.39643621593407 bayes_pls_golite062009
nucleic acid binding 1.36102432998861 bayes_pls_golite062009
heat shock protein binding 1.35268080101836 bayes_pls_golite062009
transferase activity 1.34122735969662 bayes_pls_golite062009
receptor serine/threonine kinase binding 1.32709321745178 bayes_pls_golite062009
transmembrane receptor protein serine/threonine kinase binding 1.32470025150272 bayes_pls_golite062009
transforming growth factor beta receptor binding 1.32470025150272 bayes_pls_golite062009
DNA binding 1.31957293306432 bayes_pls_golite062009
steroid hormone receptor binding 1.26630556032955 bayes_pls_golite062009
transporter activity 1.25197125648774 bayes_pls_golite062009
protein binding 1.08765413491791 bayes_pls_golite062009
SMAD binding 1.04905381164355 bayes_pls_golite062009
transmembrane transporter activity 1.03909235910355 bayes_pls_golite062009
catalytic activity 0.885282592863018 bayes_pls_golite062009
transcription activator activity 0.873307397500777 bayes_pls_golite062009
transcription repressor activity 0.841959344808827 bayes_pls_golite062009
substrate-specific transporter activity 0.789390402522536 bayes_pls_golite062009
hormone receptor binding 0.780875583795532 bayes_pls_golite062009
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen 0.777060600234881 bayes_pls_golite062009
transmembrane receptor protein serine/threonine kinase activity 0.763739321802433 bayes_pls_golite062009
transforming growth factor beta receptor activity 0.763739321802433 bayes_pls_golite062009
nuclear hormone receptor binding 0.761034574704448 bayes_pls_golite062009
intracellular ligand-gated ion channel activity 0.727019445105701 bayes_pls_golite062009
protein serine/threonine phosphatase activity 0.683689287992235 bayes_pls_golite062009
transcription factor activity 0.672036990681626 bayes_pls_golite062009
protein serine/threonine kinase activity 0.671059013500415 bayes_pls_golite062009
transferase activity, transferring hexosyl groups 0.625352830428438 bayes_pls_golite062009
procollagen-proline dioxygenase activity 0.58147873299814 bayes_pls_golite062009
peptidyl-proline 4-dioxygenase activity 0.58147873299814 bayes_pls_golite062009
peptidyl-proline dioxygenase activity 0.58147873299814 bayes_pls_golite062009
procollagen-proline 4-dioxygenase activity 0.58147873299814 bayes_pls_golite062009
transmembrane receptor protein kinase activity 0.525950701946406 bayes_pls_golite062009
signal sequence binding 0.49295886046194 bayes_pls_golite062009
enzyme binding 0.44905827271946 bayes_pls_golite062009
superoxide-generating NADPH oxidase activity 0.37588912752498 bayes_pls_golite062009
unfolded protein binding 0.27473817613726 bayes_pls_golite062009
transcription factor binding 0.273314664611729 bayes_pls_golite062009
activin binding 0.262691232876501 bayes_pls_golite062009
hydrolase activity 0.172906111259113 bayes_pls_golite062009
transcription elongation regulator activity 0.0778721788337902 bayes_pls_golite062009
peroxisome targeting sequence binding 0.0468412220974996 bayes_pls_golite062009
oxidoreductase activity, acting on NADH or NADPH, with oxygen as acceptor 0.0437303095920707 bayes_pls_golite062009
transcription cofactor activity 0.0131115480611301 bayes_pls_golite062009

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