| From Publication: | Krogan N. J. et al. (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22. |
| Notes: | From the published set of core protein complex predictions. |
| Complex Size: | 12 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| non-membrane-bounded organelle | 7.3226E-4 | 12 | 959 | 7 | 6292 |
| intracellular non-membrane-bounded organelle | 7.3226E-4 | 12 | 959 | 7 | 6292 |
| nucleolus | 6.5368E-3 | 12 | 211 | 3 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| ribosome biogenesis | 3.1264E-3 | 12 | 346 | 4 | 6292 |
| ribonucleoprotein complex biogenesis | 4.1497E-3 | 12 | 374 | 4 | 6292 |
| rRNA methylation | 5.7116E-3 | 12 | 3 | 1 | 6292 |
| regulation of endocytosis | 5.7116E-3 | 12 | 3 | 1 | 6292 |
| ribosomal large subunit biogenesis | 6.4883E-3 | 12 | 65 | 2 | 6292 |
| cellular component biogenesis | 6.5683E-3 | 12 | 694 | 5 | 6292 |
| nucleic acid metabolic process | 7.7238E-3 | 12 | 1415 | 7 | 6292 |
| regulation of cellular component organization | 8.565E-3 | 12 | 75 | 2 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| double-stranded DNA specific 3'-5' exodeoxyribonuclease activity | 3.811E-3 | 12 | 2 | 1 | 6292 |
| 5S rRNA binding | 3.811E-3 | 12 | 2 | 1 | 6292 |
| RNA binding | 3.8749E-3 | 12 | 367 | 4 | 6292 |
| binding | 4.5673E-3 | 12 | 1294 | 7 | 6292 |
| nucleic acid binding | 5.4944E-3 | 12 | 666 | 5 | 6292 |
| rRNA (uridine) methyltransferase activity | 5.7116E-3 | 12 | 3 | 1 | 6292 |
| rRNA (guanine) methyltransferase activity | 5.7116E-3 | 12 | 3 | 1 | 6292 |
| rRNA (uridine-2'-O-)-methyltransferase activity | 5.7116E-3 | 12 | 3 | 1 | 6292 |
| double-stranded DNA specific exodeoxyribonuclease activity | 7.6087E-3 | 12 | 4 | 1 | 6292 |
| O-methyltransferase activity | 7.6087E-3 | 12 | 4 | 1 | 6292 |
| rRNA primary transcript binding | 9.5026E-3 | 12 | 5 | 1 | 6292 |
| DNA-(apurinic or apyrimidinic site) lyase activity | 9.5026E-3 | 12 | 5 | 1 | 6292 |
| rRNA methyltransferase activity | 9.5026E-3 | 12 | 5 | 1 | 6292 |