| From Publication: | Riffle <i>et al</i>. (2010) (Unpublished Data) |
| Notes: | Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7 |
| Complex Size: | 15 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| DNA-directed RNA polymerase II, holoenzyme | 5.0212E-29 | 15 | 56 | 14 | 6292 |
| DNA-directed RNA polymerase II, core complex | 7.438E-27 | 15 | 12 | 10 | 6292 |
| nucleoplasm | 1.4911E-21 | 15 | 264 | 15 | 6292 |
| DNA-directed RNA polymerase complex | 4.93E-21 | 15 | 31 | 10 | 6292 |
| RNA polymerase complex | 4.93E-21 | 15 | 31 | 10 | 6292 |
| nuclear DNA-directed RNA polymerase complex | 4.93E-21 | 15 | 31 | 10 | 6292 |
| nucleoplasm part | 1.8541E-19 | 15 | 245 | 14 | 6292 |
| nuclear lumen | 5.8229E-18 | 15 | 453 | 15 | 6292 |
| organelle lumen | 1.7741E-15 | 15 | 660 | 15 | 6292 |
| intracellular organelle lumen | 1.7741E-15 | 15 | 660 | 15 | 6292 |
| membrane-enclosed lumen | 4.3281E-15 | 15 | 700 | 15 | 6292 |
| nuclear part | 4.193E-12 | 15 | 1103 | 15 | 6292 |
| protein complex | 4.6318E-10 | 15 | 1137 | 14 | 6292 |
| transcription factor TFIIF complex | 1.0965E-8 | 15 | 3 | 3 | 6292 |
| nucleus | 4.4738E-8 | 15 | 2041 | 15 | 6292 |
| macromolecular complex | 6.9919E-8 | 15 | 1635 | 14 | 6292 |
| intracellular organelle part | 2.3996E-7 | 15 | 2282 | 15 | 6292 |
| organelle part | 2.3996E-7 | 15 | 2282 | 15 | 6292 |
| DNA-directed RNA polymerase I complex | 3.9288E-6 | 15 | 14 | 3 | 6292 |
| DNA-directed RNA polymerase III complex | 7.3081E-6 | 15 | 17 | 3 | 6292 |
| nucleolar part | 1.465E-4 | 15 | 45 | 3 | 6292 |
| membrane-bounded organelle | 4.5726E-4 | 15 | 3771 | 15 | 6292 |
| intracellular membrane-bounded organelle | 4.5726E-4 | 15 | 3771 | 15 | 6292 |
| transcription factor complex | 5.6849E-4 | 15 | 71 | 3 | 6292 |
| intracellular organelle | 1.4392E-3 | 15 | 4070 | 15 | 6292 |
| organelle | 1.4445E-3 | 15 | 4071 | 15 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| RNA polymerase activity | 1.4544E-20 | 15 | 34 | 10 | 6292 |
| DNA-directed RNA polymerase activity | 1.4544E-20 | 15 | 34 | 10 | 6292 |
| nucleotidyltransferase activity | 3.7763E-13 | 15 | 168 | 10 | 6292 |
| transferase activity, transferring phosphorus-containing groups | 3.5129E-9 | 15 | 420 | 10 | 6292 |
| transferase activity | 1.6623E-6 | 15 | 797 | 10 | 6292 |
| general RNA polymerase II transcription factor activity | 4.1859E-4 | 15 | 64 | 3 | 6292 |
| positive transcription elongation factor activity | 2.384E-3 | 15 | 1 | 1 | 6292 |
| RNA polymerase II transcription factor activity | 3.2694E-3 | 15 | 130 | 3 | 6292 |
| transcription regulator activity | 7.0355E-3 | 15 | 339 | 4 | 6292 |