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Protein Overview: NUP2

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)
View Run ZDS1 Sample 2- cpn2 from june 2005 McCusker D, et al (2007)
View Run ZDS1 Sample 3 - cpn + atp, from june 2005 McCusker D, et al (2007)

Yeast Two-Hybrid Data

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data NUP2 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..149] deduced N/A No confident structure predictions are available.
2 View Details [150..273] ORFEUS 14.0 Sec24
3 View Details [274..279]
[505..585]
ORFEUS 11.01 No description for 1l8mA was found.
4 View Details [280..352] ORFEUS 11.01 No description for 1l8mA was found.
5 View Details [353..434] ORFEUS 11.01 No description for 1l8mA was found.
6 View Details [435..504] ORFEUS 11.01 No description for 1l8mA was found.
7 View Details [586..720] PSI-BLAST 134.190949 Nuclear pore complex protein Nup358

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2 No functions predicted.
3 No functions predicted.
4 No functions predicted.
5
Term Confidence Notes
  • binding
  • 3.29080729281876 bayes_pls_golite062009
  • protein binding
  • 2.12168271674167 bayes_pls_golite062009
  • transcription regulator activity
  • 2.10584700564436 bayes_pls_golite062009
  • nucleic acid binding
  • 1.85794418941003 bayes_pls_golite062009
  • DNA binding
  • 1.77960272183811 bayes_pls_golite062009
  • cytoskeletal protein binding
  • 1.57773829313464 bayes_pls_golite062009
  • actin binding
  • 1.43502308486445 bayes_pls_golite062009
  • transporter activity
  • 1.28986800087234 bayes_pls_golite062009
  • signal transducer activity
  • 1.15625292719687 bayes_pls_golite062009
  • molecular transducer activity
  • 1.15625292719687 bayes_pls_golite062009
  • Ran GTPase binding
  • 1.07023555877478 bayes_pls_golite062009
  • RNA binding
  • 0.970967965545589 bayes_pls_golite062009
  • substrate-specific transporter activity
  • 0.79883446648737 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
  • 0.719838770435905 bayes_pls_golite062009
  • receptor activity
  • 0.369903612832044 bayes_pls_golite062009
  • hydrolase activity
  • 0.354215977182915 bayes_pls_golite062009
  • protein domain specific binding
  • 0.18356841109571 bayes_pls_golite062009
  • structural molecule activity
  • 0.160152014803717 bayes_pls_golite062009
  • transmembrane receptor activity
  • 0.159652062741581 bayes_pls_golite062009
  • pyrophosphatase activity
  • 0.0611639610381174 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
  • 0.0524559849408587 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
  • 0.0498422520006935 bayes_pls_golite062009
    6 No functions predicted.
    7 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle