Protein Overview: gi|2961610

General Information:
Name(s) found:	gi\|2961610 [NCBI NR]
Description(s) found: SHOW ONLY BEST	gi\|2961610\|gb\|AAC24516.1\| class A calcium channel variant riA-I [Rattus norvegicus] [NCBI NR] Ensembl_locations(Chr-bp):13-10129353 Class A calcium channel variant riA-I [hmr_yeast5_DM3-1_pombe.fasta] class A calcium channel variant riA-I [Rattus norvegicus] [nrdb_11152004_Chlamydomonas] Tax_Id=10116 Class A calcium channel variant riA-I (Fragment) [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta] Tax_Id=10116 Class A calcium channel variant riA-I [EBI-IPI_rat_3.13_12-01-2005_con_reversed.fasta] Tax_Id=10116 CLASS A CALCIUM CHANNEL VARIANT RIA-I [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta] Tax_Id=10116 Gene_Symbol=Cacna1a Class A calcium channel variant riA-I (Fragment) [rat-ipi-250309-contam.fasta] Class A calcium channel variant riA-I (Fragment) OS=Rattus norvegicus GN=Cacna1a [011711_HMR.fasta]
Organism:	Rattus norvegicus
Length:	791 amino acids
Gene Ontology:
Cellular Component:	nucleus [UNKNOWN][IEA] dendrite [UNKNOWN][IEA] cytoplasm [UNKNOWN][IEA] membrane [IEA] voltage-gated calcium channel complex [UNKNOWN][IDA][IEA][TAS] integral to membrane [IEA] neuronal cell body [UNKNOWN] perikaryon [IDA] cell projection [UNKNOWN][IEA] plasma membrane [UNKNOWN][IDA][IMP]
Biological Process:	nerve-nerve synaptic transmission [UNKNOWN] rhythmic synaptic transmission [UNKNOWN][IEA] neuromuscular synaptic transmission [UNKNOWN][IEA] neurotransmitter metabolic process [UNKNOWN][IEA] central nervous system neuron differentiation [UNKNOWN] cerebellar molecular layer development [UNKNOWN][IEA] glucose metabolic process [UNKNOWN][IEA] vestibular nucleus development [UNKNOWN][IEA] gamma-aminobutyric acid signaling pathway [UNKNOWN][IEA] negative regulation of neuron apoptosis [UNKNOWN][IEA] dendrite morphogenesis [UNKNOWN][IEA] response to pain [UNKNOWN] adult walking behavior [UNKNOWN][IEA] cerebellar Purkinje cell layer development [UNKNOWN][IEA] ion transport [IEA] cell death [UNKNOWN][IEA] regulation of axonogenesis [UNKNOWN][IEA] calcium ion transport [UNKNOWN][IDA][IEA][IMP] behavioral response to pain [UNKNOWN][IEA] transmission of nerve impulse [UNKNOWN] neurological system process [UNKNOWN] cellular chloride ion homeostasis [UNKNOWN][IEA] regulation of acetylcholine secretion [UNKNOWN][IEA] transmembrane transport [IEA] cerebellar Purkinje cell differentiation [UNKNOWN][IEA] neuromuscular process [UNKNOWN] gamma-aminobutyric acid secretion [UNKNOWN][IEA] spinal cord motor neuron differentiation [UNKNOWN][IEA] synaptic transmission [UNKNOWN][IMP] receptor clustering [UNKNOWN][IEA] hormone metabolic process [UNKNOWN][IEA] elevation of cytosolic calcium ion concentration [UNKNOWN][IEA][ISS] thyroid hormone metabolic process [UNKNOWN] musculoskeletal movement, spinal reflex action [UNKNOWN][IEA] synapse assembly [UNKNOWN][IEA] calcium ion-dependent exocytosis of neurotransmitter [UNKNOWN][IEA] regulation of membrane potential [UNKNOWN] sulfur amino acid metabolic process [UNKNOWN][IEA] cerebellum maturation [UNKNOWN][IEA] calcium ion-dependent exocytosis [UNKNOWN] negative regulation of hormone biosynthetic process [UNKNOWN][IEA] regulation of calcium ion-dependent exocytosis [UNKNOWN][IEA] membrane depolarization [UNKNOWN][IEA] [NOT]synaptic transmission, GABAergic [UNKNOWN] cell growth [UNKNOWN][IEA] neuromuscular process controlling balance [UNKNOWN][IEA] synaptic transmission, glutamatergic [UNKNOWN][IEA]
Molecular Function:	ion channel activity [IEA] calmodulin binding [IDA] protein binding [UNKNOWN][IPI] high voltage-gated calcium channel activity [UNKNOWN][IEA] syntaxin binding [UNKNOWN][IEA] voltage-gated ion channel activity [IEA] voltage-gated calcium channel activity [UNKNOWN][IDA][IEA][ISS][TAS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VMAFGILNYF RDAWNIFDFV TVLGSITDIL VTEFGNPNNF INLSFLRLFR AARLIKLLRQ  60
   61 GYTIRILLWT FVQSFKALPY VCLLIAMLFF IYAIIGMQVF GNIGIDGEDE DSDEDEFQIT 120
  121 EHNNFRTFFQ ALMLLFRSAT GEAWHNIMLS CLSGKPCDKN SGIQKPECGN EFAYFYFVSF 180
  181 IFLCSFLMLN LFVAVIMDNF EYLTRDSSIL GPHHLDEYVR VWAEYDPAAW GRMPYPDMYQ 240
  241 MLRHMSPPLG LGKKCPARVA YKRLLRMDLP VADDNTVHFN STLMALIRTA LDIKIAKGGA 300
  301 DKQQMDAELR KEMMAIWPNL SQKTLDLLVT PHKSTDLTVG KIYAAMMIME YYRQSKAKKL 360
  361 QAMREEQNRT PLMFQRMEPP SPTQEGGPSQ NALPSTQLDP GGGLMAQESS MKESPSWVTQ 420
  421 RAQEMFQKTG TWSPERGPPI DMPNSQPNSQ SVEMREMGTD GYSDSEHYLP MEGQTRAASM 480
  481 PRLPAENQTI SDTSPMKRSA SVLGPKARRL DDYSLERVPP EENQRYHQRR RDRGHRTSER 540
  541 SLGRYTDVDT GLGTDLSMTT QSGDLPSKDR DQDRGRPKDR KHRPHHHHHH HHHHPPAPDR 600
  601 ERYAQERPDT GRARAREQRW SRSPSEGREH ATHRQGSSSV SGSPAPSTSG TSTPRRGRRQ 660
  661 LPQTPCTPRP LVSYSPAPRR PAARRMAGPP APPGGSPRGC RRAPRWPAHA PEGPRPRGAD 720
  721 YTEPDSPREP PGGAHEPAPR SPRTPRAAGC ASPRHGRRLP NGYYAGHGAP RPRTARRGAH 780
  781 DAYSESEDDW C

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein Overview: gi|2961610

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: