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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|2961610
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VMAFGILNYF RDAWNIFDFV TVLGSITDIL VTEFGNPNNF INLSFLRLFR AARLIKLLRQ  60
   61 GYTIRILLWT FVQSFKALPY VCLLIAMLFF IYAIIGMQVF GNIGIDGEDE DSDEDEFQIT 120
  121 EHNNFRTFFQ ALMLLFRSAT GEAWHNIMLS CLSGKPCDKN SGIQKPECGN EFAYFYFVSF 180
  181 IFLCSFLMLN LFVAVIMDNF EYLTRDSSIL GPHHLDEYVR VWAEYDPAAW GRMPYPDMYQ 240
  241 MLRHMSPPLG LGKKCPARVA YKRLLRMDLP VADDNTVHFN STLMALIRTA LDIKIAKGGA 300
  301 DKQQMDAELR KEMMAIWPNL SQKTLDLLVT PHKSTDLTVG KIYAAMMIME YYRQSKAKKL 360
  361 QAMREEQNRT PLMFQRMEPP SPTQEGGPSQ NALPSTQLDP GGGLMAQESS MKESPSWVTQ 420
  421 RAQEMFQKTG TWSPERGPPI DMPNSQPNSQ SVEMREMGTD GYSDSEHYLP MEGQTRAASM 480
  481 PRLPAENQTI SDTSPMKRSA SVLGPKARRL DDYSLERVPP EENQRYHQRR RDRGHRTSER 540
  541 SLGRYTDVDT GLGTDLSMTT QSGDLPSKDR DQDRGRPKDR KHRPHHHHHH HHHHPPAPDR 600
  601 ERYAQERPDT GRARAREQRW SRSPSEGREH ATHRQGSSSV SGSPAPSTSG TSTPRRGRRQ 660
  661 LPQTPCTPRP LVSYSPAPRR PAARRMAGPP APPGGSPRGC RRAPRWPAHA PEGPRPRGAD 720
  721 YTEPDSPREP PGGAHEPAPR SPRTPRAAGC ASPRHGRRLP NGYYAGHGAP RPRTARRGAH 780
  781 DAYSESEDDW C

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle