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Protein Overview: MRPS8

General Information:
Name(s) found: MRPS8 / YMR158W [SGD]
Description(s) found:
Found 29 descriptions.
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  • Mitochondrial ribosomal protein of the small subunit [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 155 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDALink to PubMed article]
    mitochondrial small ribosomal subunit [IPILink to PubMed article]
    Biological Process: translation [ICLink to PubMed article]
    Molecular Function: structural constituent of ribosome [IPILink to PubMed article][ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLVKLANTC AHLQNCSKVR VALTSIPYTK LQLQFAYNLY QQGFLSSLQK GSTMGPDKDF  60
   61 VEVTPDNIST RRLWVGLKYR DNKPVLSSCK LISKPNSRIH LPMEDMKKLC SGVTIRNIKP 120
  121 LQPGELILVR AHNNIMDINE AISKKLDGEV LCRVK

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Riffle et al. (2010) (Unpublished Data) MRP1 MRP13 MRP21 MRP4 MRP51 MRPS17 MRPS18 MRPS28 MRPS35 MRPS5 MRPS8 MRPS9 NAM9 PET123 RSM10 RSM19 RSM22 RSM23 RSM24 RSM25 RSM26 RSM27 RSM7
    View Details (MIPS) Mewes HW, et al. (2004) MRP1 MRP10 MRP13 MRP17 MRP2 MRP21 MRP4 MRP51 MRPS16 MRPS17 MRPS18 MRPS28 MRPS35 MRPS5 MRPS8 MRPS9 NAM9 PET123 PPE1 RSM10 RSM18 RSM19 RSM22 RSM23 RSM24 RSM25 RSM26 RSM27 RSM7 VAR1 YMR31
    View Details Krogan NJ, et al. (2006) MRPS8 TYS1 YBL036C
    View Details Gavin AC, et al. (2006) EHD3 MRP1 MRP13 MRP17 MRP21 MRP4 MRP51 MRPS16 MRPS17 MRPS18 MRPS28 MRPS5 MRPS8 MRPS9 NAM9 PET123 RSM10 RSM19 RSM22 RSM23 RSM25 RSM27 RSM7
    View Details Gavin AC, et al. (2002) BEM2 CCM1 ECM16 EHD3 FYV4 GEP3 HSC82 MRP1 MRP10 MRP13 MRP17 MRP21 MRP4 MRP51 MRPS16 MRPS17 MRPS18 MRPS28 MRPS5 MRPS8 MRPS9 NAM9 PAP2 PET123 PSD2 PUS7 RIX1 RSM10 RSM19 RSM22 RSM23 RSM24 RSM25 RSM26 RSM27 RSM7 TIF4631 UBP10 UTP20 UTP22
    View Details Qiu et al. (2008) IMG1 MAM33 MNP1 MRP1 MRP10 MRP13 MRP17 MRP2 MRP21 MRP4 MRP49 MRP51 MRP7 MRPL1 MRPL11 MRPL13 MRPL15 MRPL16 MRPL17 MRPL19 MRPL22 MRPL23 MRPL24 MRPL25 MRPL27 MRPL28 MRPL3 MRPL31 MRPL32 MRPL35 MRPL36 MRPL37 MRPL38 MRPL39 MRPL40 MRPL49 MRPL51 MRPL6 MRPL7 MRPL8 MRPL9 MRPS12 MRPS16 MRPS17 MRPS18 MRPS28 MRPS35 MRPS5 MRPS8 MRPS9 NAM9 PET123 RPS12 RPS22A RPS25B RPS26B RSM10 RSM18 RSM19 RSM22 RSM23 RSM24 RSM25 RSM26 RSM27 RSM28 RSM7 SWS2 VAR1 YML6 YMR31

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run BOI1 Sample bob1 (2nd set) from october 2005 McCusker D, et al (2007)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen TWF1 MRPS8 1 Unpublished Fields Lab Data
    View Screen UBC7 MRPS8 1 Unpublished Fields Lab Data

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..90] PSI-BLAST 74.228787 Ribosomal protein S8
    2 View Details [91..155] PSI-BLAST 74.228787 Ribosomal protein S8

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  9.91574154879999 bayes_pls_golite062009
  • structural molecule activity
    		•  9.33953790706737 bayes_pls_golite062009
  • RNA binding
    		•  1.37413951383134 bayes_pls_golite062009
  • binding
    		•  1.233710741259 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.748509060999477 bayes_pls_golite062009
  • protein binding
    		•  0.569993864025864 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle