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Protein Overview: gi|24350750, gi|...

General Information:
Name(s) found: gi|24375800 [NCBI NR]
gi|24350750 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|24375800|ref|NP_719843.1| toxin secretion ATP-binding protein [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24350750|gb|AAN57287.1|AE015865_1 toxin secretion ATP-binding protein [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 726 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: pathogenesis [ISSLink to PubMed article]
    Molecular Function: transporter activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVTASEKVE QWTISASQRV IVDPLLDCLV LLTEHFGNPC SSDSLAAGLP LSGAVLTPDL  60
   61 LPQAASRAGL AAKLSRKGLN EISPILLPCI LLLKDKKACI LREFDLESDR AVIQLPETGG 120
  121 EEILTIESLE TLYVGYLFLV KQEYRGDMGF DVYLHDNKTH WLVQTLKDSA PIYRDALIAS 180
  181 VLVNIFALVS PLFIMNVYDK VVPNLAFDSL WVLAIGASIA YLFDLVMRQL RSYLIDVAGK 240
  241 KVDIIVSSRL FAKAIGIPLE KRSPSIGGMA KQLGEFDSIR EILTSATITT LVDLPFALFF 300
  301 LIVIYIVAGD LAVIPVVGGM IIIGFTLYTQ PKLKAAIEEG NKFSSLKHGH LIESLSALES 360
  361 IKANGAEGIV QKSWQQMIGH SANWQLKSKK LSNSVSNTAN FIVQFTVVCV VILGVYRVSD 420
  421 NLISMGGIIA AVMLSSRAIA PMAQLAGLMT RANHTASALR QLNELMLQED EFENKGHLVS 480
  481 KQRLIGKINA DHVGFSYPGS EKPVLHPLSL TINPGERIAI IGRNGSGKST LAKLLVGLFQ 540
  541 PTTGSLRYDG VDSAQIHPSD LRRNFGYLPQ DVTLFHGTIR DNILFGTRQV TEHQLIRAVQ 600
  601 LSGVSQFTHL EAEGLDQQVG EGGMSLSRGQ RQTVALARAT LNDPPVLLMD EPTASLDARA 660
  661 EQQFIRSMQN VSKDRTLLLI THKMHLLQLV DRIIVLERGH VVADGPKAEV LEKLNFGLVN 720
  721 GGAKNE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..156] FFAS03 1.06 Crystal structure of Alr0975
    2 View Details [157..726] PSI-BLAST 137.0 No description for 2hydA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity
    		•  4.53429032675022 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  4.18402651416045 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  3.57428315299968 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  3.53413874981626 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  3.52357906265004 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  3.52291570006599 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  2.42574977529545 bayes_pls_golite062009
  • organic acid transmembrane transporter activity
    		•  1.25857807862806 bayes_pls_golite062009
  • carboxylic acid transmembrane transporter activity
    		•  1.25345956835782 bayes_pls_golite062009
  • transporter activity
    		•  1.23498653103608 bayes_pls_golite062009
  • protein binding
    		•  1.23312890571206 bayes_pls_golite062009
  • ATP binding
    		•  1.19833964672025 bayes_pls_golite062009
  • adenyl ribonucleotide binding
    		•  1.17563570106943 bayes_pls_golite062009
  • adenyl nucleotide binding
    		•  1.15417474725353 bayes_pls_golite062009
  • binding
    		•  1.04960280728954 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  1.01797574065867 bayes_pls_golite062009
  • ribonucleotide binding
    		•  1.01745281184859 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.01693169412073 bayes_pls_golite062009
  • purine nucleotide binding
    		•  0.99666728209849 bayes_pls_golite062009
  • nucleotide binding
    		•  0.964821935877509 bayes_pls_golite062009
  • amine transmembrane transporter activity
    		•  0.872536518313689 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.754075761537978 bayes_pls_golite062009
  • catalytic activity
    		•  0.452849626127585 bayes_pls_golite062009
  • cysteine-type peptidase activity
    		•  0.410932882524508 bayes_pls_golite062009
  • amino acid transmembrane transporter activity
    		•  0.12297648698063 bayes_pls_golite062009
  • signal transducer activity
    		•  0.0317806731782007 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.0317806731782007 bayes_pls_golite062009
    2
    Term Confidence Notes
  • lipid transporter activity
    		•  7.47642599298853 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of substances
    		•  5.57844095962502 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
    		•  5.57813579764186 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
    		•  5.57813579764186 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
    		•  5.5689620139321 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  5.55992639965745 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  5.50005167063544 bayes_pls_golite062009
  • ATPase activity, coupled
    		•  4.98276715440477 bayes_pls_golite062009
  • peptide transporter activity
    		•  4.7442815698413 bayes_pls_golite062009
  • ATPase activity
    		•  4.69795387297193 bayes_pls_golite062009
  • peptide-transporting ATPase activity
    		•  4.63590351019108 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  4.45923622153365 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  4.39781350157199 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  4.38133275795019 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  4.38085303582726 bayes_pls_golite062009
  • oligopeptide-transporting ATPase activity
    		•  4.09365342567844 bayes_pls_golite062009
  • transporter activity
    		•  3.71239480053329 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  3.35436118751376 bayes_pls_golite062009
  • hydrogen ion transporting ATP synthase activity, rotational mechanism
    		•  3.19399273923292 bayes_pls_golite062009
  • hydrolase activity
    		•  3.14498892233323 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.13960906549884 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.1318898376276 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  3.08390071341252 bayes_pls_golite062009
  • iron ion transmembrane transporter activity
    		•  3.05511942104215 bayes_pls_golite062009
  • ATP binding
    		•  3.01346604299372 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  3.00745742755195 bayes_pls_golite062009
  • drug transmembrane transporter activity
    		•  2.97119034312001 bayes_pls_golite062009
  • adenyl ribonucleotide binding
    		•  2.96271391116269 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  2.9271291809464 bayes_pls_golite062009
  • adenyl nucleotide binding
    		•  2.91131545957759 bayes_pls_golite062009
  • branched-chain aliphatic amino acid transmembrane transporter activity
    		•  2.88795687640992 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  2.88476360771975 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  2.70262534541085 bayes_pls_golite062009
  • ribonucleotide binding
    		•  2.70178191749524 bayes_pls_golite062009
  • amine-transporting ATPase activity
    		•  2.69529191205818 bayes_pls_golite062009
  • organic acid transmembrane transporter activity
    		•  2.67957846350199 bayes_pls_golite062009
  • carboxylic acid transmembrane transporter activity
    		•  2.67815672695824 bayes_pls_golite062009
  • purine nucleotide binding
    		•  2.6583477492092 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  2.63419811368692 bayes_pls_golite062009
  • nucleotide binding
    		•  2.62374702628143 bayes_pls_golite062009
  • sterol transporter activity
    		•  2.48473697371886 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  2.40292717311506 bayes_pls_golite062009
  • amine transmembrane transporter activity
    		•  2.29486577878686 bayes_pls_golite062009
    		• 2.20174656498665 bayes_pls_golite062009
  • anion transmembrane-transporting ATPase activity
    		•  2.12727614888121 bayes_pls_golite062009
  • oligopeptide transporter activity
    		•  2.05580564974083 bayes_pls_golite062009
  • inorganic anion transmembrane transporter activity
    		•  1.88153949603611 bayes_pls_golite062009
  • transition metal ion transmembrane transporter activity
    		•  1.82177108193332 bayes_pls_golite062009
  • protein transporter activity
    		•  1.71214667007262 bayes_pls_golite062009
  • amino acid transmembrane transporter activity
    		•  1.59627719545436 bayes_pls_golite062009
  • binding
    		•  1.39093533263371 bayes_pls_golite062009
  • cation channel activity
    		•  1.33585529285301 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of ions
    		•  1.23799860254751 bayes_pls_golite062009
  • potassium channel activity
    		•  1.20877745413881 bayes_pls_golite062009
  • dipeptide transporter activity
    		•  1.01130176523309 bayes_pls_golite062009
  • voltage-gated cation channel activity
    		•  1.00384984515681 bayes_pls_golite062009
  • voltage-gated ion channel activity
    		•  0.889208591820696 bayes_pls_golite062009
  • motor activity
    		•  0.87979065815418 bayes_pls_golite062009
  • voltage-gated channel activity
    		•  0.871525745291603 bayes_pls_golite062009
  • ion channel activity
    		•  0.848261056209476 bayes_pls_golite062009
  • GTPase activity
    		•  0.83849854735032 bayes_pls_golite062009
  • passive transmembrane transporter activity
    		•  0.806331380134838 bayes_pls_golite062009
  • channel activity
    		•  0.806331380134838 bayes_pls_golite062009
  • substrate-specific channel activity
    		•  0.799997700906738 bayes_pls_golite062009
  • copper ion transmembrane transporter activity
    		•  0.798934081014025 bayes_pls_golite062009
  • di-, tri-valent inorganic cation transmembrane transporter activity
    		•  0.767424210804186 bayes_pls_golite062009
  • gated channel activity
    		•  0.650050847753837 bayes_pls_golite062009
  • cholesterol transporter activity
    		•  0.644421039250979 bayes_pls_golite062009
  • guanyl nucleotide binding
    		•  0.640772201693186 bayes_pls_golite062009
  • guanyl ribonucleotide binding
    		•  0.63468044350616 bayes_pls_golite062009
  • GTP binding
    		•  0.621689261700018 bayes_pls_golite062009
  • protein binding
    		•  0.569246647740442 bayes_pls_golite062009
  • L-aspartate transmembrane transporter activity
    		•  0.483217496906356 bayes_pls_golite062009
  • anion transmembrane transporter activity
    		•  0.43332053110728 bayes_pls_golite062009
  • neutral amino acid transmembrane transporter activity
    		•  0.227570438294493 bayes_pls_golite062009
  • proton-transporting ATPase activity, rotational mechanism
    		•  0.219473333671469 bayes_pls_golite062009
  • signal recognition particle binding
    		•  0.20866768220789 bayes_pls_golite062009
  • amino acid-transporting ATPase activity
    		•  0.147644650870465 bayes_pls_golite062009
  • cation-transporting ATPase activity
    		•  0.0536898657672154 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle