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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24350750, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVTASEKVE QWTISASQRV IVDPLLDCLV LLTEHFGNPC SSDSLAAGLP LSGAVLTPDL  60
   61 LPQAASRAGL AAKLSRKGLN EISPILLPCI LLLKDKKACI LREFDLESDR AVIQLPETGG 120
  121 EEILTIESLE TLYVGYLFLV KQEYRGDMGF DVYLHDNKTH WLVQTLKDSA PIYRDALIAS 180
  181 VLVNIFALVS PLFIMNVYDK VVPNLAFDSL WVLAIGASIA YLFDLVMRQL RSYLIDVAGK 240
  241 KVDIIVSSRL FAKAIGIPLE KRSPSIGGMA KQLGEFDSIR EILTSATITT LVDLPFALFF 300
  301 LIVIYIVAGD LAVIPVVGGM IIIGFTLYTQ PKLKAAIEEG NKFSSLKHGH LIESLSALES 360
  361 IKANGAEGIV QKSWQQMIGH SANWQLKSKK LSNSVSNTAN FIVQFTVVCV VILGVYRVSD 420
  421 NLISMGGIIA AVMLSSRAIA PMAQLAGLMT RANHTASALR QLNELMLQED EFENKGHLVS 480
  481 KQRLIGKINA DHVGFSYPGS EKPVLHPLSL TINPGERIAI IGRNGSGKST LAKLLVGLFQ 540
  541 PTTGSLRYDG VDSAQIHPSD LRRNFGYLPQ DVTLFHGTIR DNILFGTRQV TEHQLIRAVQ 600
  601 LSGVSQFTHL EAEGLDQQVG EGGMSLSRGQ RQTVALARAT LNDPPVLLMD EPTASLDARA 660
  661 EQQFIRSMQN VSKDRTLLLI THKMHLLQLV DRIIVLERGH VVADGPKAEV LEKLNFGLVN 720
  721 GGAKNE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle