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View Structure Prediction Details

Protein: SPAC17H9.02
Organism: Schizosaccharomyces pombe
Length: 1030 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC17H9.02.

Description E-value Query
Range		 Subject
Range
SKIV2L2 - superkiller viralicidic activity 2-like 2 (S. cerevisiae)
 739.0 [0..20] [1030..42]
gi|114600242 - gi|114600242|ref|XP_001145794.1| PREDICTED: superkiller viralicidic activity 2-like 2 isoform 2 [Pan...
 738.0 [0..20] [1030..42]
SK2L2_MOUSE - Superkiller viralicidic activity 2-like 2 OS=Mus musculus GN=Skiv2l2 PE=1 SV=1
gi|71681012 - gi|71681012|gb|AAH99802.1| RGD1305984 protein [Rattus norvegicus]
 738.0 [0..18] [1030..36]
gi|114325466 - gi|114325466|gb|AAH28604.3| Superkiller viralicidic activity 2-like 2 (S. cerevisiae) [Homo sapiens]
gi|61363854 - gi|61363854|gb|AAX42455.1| KIAA0052 protein [synthetic construct]
 736.0 [0..20] [1030..42]
gi|149059353, gi... - gi|77539760|ref|NP_001029265.1| superkiller viralicidic activity 2-like 2 [Rattus norvegicus], gi|14...
 736.0 [0..39] [1030..61]
gi|73949523 - gi|73949523|ref|XP_849676.1| PREDICTED: similar to Superkiller viralicidic activity 2-like 2 isoform...
 735.0 [0..20] [1030..42]

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Predicted Domain #1
Region A:
Residues: [1-101] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSENSTDSKN FQFSEGSRES SNDELKVLLR DTETKEDEKS SFSNSEEESI IENLSDSSVN  60
   61 KEYAKNSLKL SDAVSESKYL NPLLKDKRHD RSFALHKVVV P

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [102-842] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DDYDYIPLNK HIPSDPPAKT YPFELDPFQS TAIKCVERME SVLVSAHTSA GKTVIAEYAI  60
   61 AQALKNRQRV IYTSPIKSLS NQKYRELLSE FGDVGLMTGD VSINPSASCL IMTTEILRAM 120
  121 LYKNSEIMHE IAWVIFDEVH YMRDKDRGVV WEETLILLPD AIRFIFLSAT LPNALQFARW 180
  181 ISEIHKQPCH VVYTDYRPTP LQHFIYPQGA DGIYMLVDEK NKFKTENFKK VLEVLDHSTR 240
  241 QENYSKSSKK VKKSSSLERI INMVLSNRYD PIIVFCFSKK ECEINAHQFG KLDLNDTENK 300
  301 ELVTEIFDSA INQLSEEDRG LRQFEEMRSL LLRGIGIHHS GLLPILKELV EILFQEGLVR 360
  361 ILFATETFSI GLNMPARTVL FTKAQKFSGN NFRWLTSGEY MQMSGRAGRR GIDTKGLSIV 420
  421 ILDQSIDEQA ARCLMNGQAD VLNSAFHLSY GMILNLMRIE EISPEDILKK SFYQFQNMES 480
  481 LPLIKEELMQ LKNEETSINI PNETAVKEFH DLKLQLEKYG EEIQKVMTHP DNCLPYLQSG 540
  541 RLIQIKLGGI IFPWGVLVNV IKREFDPNTR EQVAPHETYV LDVLLPISSN SMSNHKVNPS 600
  601 ILVPPRPNET PLYEIVSVLL TAVCNISSIR IYMPRELNSN ESKLRAYRRV NEVIEEFKEI 660
  661 PYLDPLEHMH IESSTLSLSL RKLEILEPKL FDSPYYKDSK HRAEYHEFRK KLNLRAQIKD 720
  721 ISTKITNTEA IIQLRELKIR Q

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 38.39794
Match: 2p6rA
Description: No description for 2p6rA was found.

Predicted functions:

Term Confidence Notes
nucleoside-triphosphatase activity 2.95079405147356 bayes_pls_golite062009
pyrophosphatase activity 2.87427509025394 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides 2.85499564954033 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 2.85178667290149 bayes_pls_golite062009
binding 2.64537357529343 bayes_pls_golite062009
transporter activity 2.58140740499725 bayes_pls_golite062009
hydrolase activity 2.55157966585974 bayes_pls_golite062009
transmembrane transporter activity 2.39695871109024 bayes_pls_golite062009
ATPase activity 2.39535714892224 bayes_pls_golite062009
ATPase activity, coupled 2.18396165590908 bayes_pls_golite062009
RNA helicase activity 1.42791449104435 bayes_pls_golite062009
nucleic acid binding 1.41477043612798 bayes_pls_golite062009
RNA-dependent ATPase activity 1.39335733374328 bayes_pls_golite062009
ATP-dependent RNA helicase activity 1.36724390116598 bayes_pls_golite062009
motor activity 1.34881124154297 bayes_pls_golite062009
substrate-specific transporter activity 1.29730375126024 bayes_pls_golite062009
protein binding 1.22129154759482 bayes_pls_golite062009
DNA binding 1.11699929651302 bayes_pls_golite062009
catalytic activity 1.00104173493322 bayes_pls_golite062009
transcription regulator activity 0.989226939888218 bayes_pls_golite062009
purine nucleotide binding 0.929901285538132 bayes_pls_golite062009
nucleotide binding 0.922442819194247 bayes_pls_golite062009
purine ribonucleotide binding 0.920987930180051 bayes_pls_golite062009
ribonucleotide binding 0.920926158369519 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 0.906554174337376 bayes_pls_golite062009
ribonuclease activity 0.712344060953362 bayes_pls_golite062009
helicase activity 0.6191010101321 bayes_pls_golite062009
ligase activity 0.491120745447751 bayes_pls_golite062009
0.442119153778711 bayes_pls_golite062009
active transmembrane transporter activity 0.434775387083003 bayes_pls_golite062009
ATP binding 0.41092997612902 bayes_pls_golite062009
adenyl ribonucleotide binding 0.385813421701492 bayes_pls_golite062009
adenyl nucleotide binding 0.377870145186619 bayes_pls_golite062009
ion transmembrane transporter activity 0.355466224802969 bayes_pls_golite062009
microtubule motor activity 0.32730260506261 bayes_pls_golite062009
purine NTP-dependent helicase activity 0.29664013896754 bayes_pls_golite062009
ATP-dependent helicase activity 0.29664013896754 bayes_pls_golite062009
primary active transmembrane transporter activity 0.294474570607914 bayes_pls_golite062009
P-P-bond-hydrolysis-driven transmembrane transporter activity 0.282352478532746 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances 0.220608508617331 bayes_pls_golite062009
ATPase activity, coupled to transmembrane movement of substances 0.219533217661421 bayes_pls_golite062009
ATPase activity, coupled to movement of substances 0.219157471322311 bayes_pls_golite062009
GTPase activity 0.105546189348878 bayes_pls_golite062009
microfilament motor activity 0.10236059675512 bayes_pls_golite062009
transcription factor activity 0.0434163635422169 bayes_pls_golite062009
protein transporter activity 0.0397092337273124 bayes_pls_golite062009
guanyl nucleotide binding 0.0289841199143713 bayes_pls_golite062009
RNA binding 0.0261282189186349 bayes_pls_golite062009
cation transmembrane transporter activity 0.0254369227200564 bayes_pls_golite062009
guanyl ribonucleotide binding 0.0187537754688351 bayes_pls_golite062009
GTP binding 0.0171298013679982 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [843-1030] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RVLRRLGFCT LENVIDIKGR VACEITSGDE LLLVELIFQG FFNQMPPEEI AAALSCFVYE  60
   61 DKSEVSTLNL KEPFKKMYLT IIEAAKRIAT VSLESKLQFN ESDYLHQFKP DIMEPVSLWI 120
  121 NGASFQEICI VSKLYEGSIV RTFRRLDELL KQLEHAAIVL GNNELKEKSV LTEQKLHRDI 180
  181 IFSASLYL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 52.221849
Match: 2q0zX
Description: No description for 2q0zX was found.

Predicted functions:

Term Confidence Notes
binding 2.65544526722793 bayes_pls_golite062009
protein binding 2.55331587515144 bayes_pls_golite062009
voltage-gated cation channel activity 1.94268098951022 bayes_pls_golite062009
transporter activity 1.94143938635343 bayes_pls_golite062009
cation channel activity 1.84843298243351 bayes_pls_golite062009
voltage-gated potassium channel activity 1.82318341284761 bayes_pls_golite062009
voltage-gated ion channel activity 1.81839281588293 bayes_pls_golite062009
voltage-gated channel activity 1.81742923395177 bayes_pls_golite062009
potassium channel activity 1.81257297770622 bayes_pls_golite062009
transmembrane transporter activity 1.81071289575882 bayes_pls_golite062009
substrate-specific transporter activity 1.76281327097473 bayes_pls_golite062009
ion channel activity 1.70663166559662 bayes_pls_golite062009
cation transmembrane transporter activity 1.70274134661261 bayes_pls_golite062009
gated channel activity 1.68818168029572 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 1.66007375521419 bayes_pls_golite062009
ion transmembrane transporter activity 1.65899897018442 bayes_pls_golite062009
substrate-specific channel activity 1.65208263051952 bayes_pls_golite062009
channel activity 1.63616928632474 bayes_pls_golite062009
passive transmembrane transporter activity 1.63616928632474 bayes_pls_golite062009
metal ion transmembrane transporter activity 1.52401313013637 bayes_pls_golite062009
ligand-gated channel activity 1.32367033892557 bayes_pls_golite062009
ligand-gated ion channel activity 1.32367033892557 bayes_pls_golite062009
actin binding 1.32092343528021 bayes_pls_golite062009
cytoskeletal protein binding 1.24469346535998 bayes_pls_golite062009
hydrolase activity 0.524040950977088 bayes_pls_golite062009
inward rectifier potassium channel activity 0.43450134854604 bayes_pls_golite062009
structural molecule activity 0.10665287466831 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle