| Protein: | Rs1-PA, FBpp0311849 |
| Organism: | Drosophila melanogaster |
| Length: | 782 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Rs1-PA, FBpp0311849.
| Description | E-value | Query Range |
Subject Range |
|
|
474.0 | [0..1] | [782..1] |
|
Region A: Residues: [1-105] |
1 11 21 31 41 51
| | | | | |
1 MGATKNLDLI GTIEDDAEVE NLSEDSDAEV EYQPTKLRHK KVTEFEKGFE FVSSVKEYNQ 60
61 DTWDDLMKYV KRKARTKTDD KIAARLQKRG GAEAVAAEQS DGSEI
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [106-157] |
1 11 21 31 41 51
| | | | | |
1 DLSEDELKHD NLRLREKKES KKKKKKAGEE DEEDEGEKMQ FADTVEANEQ IT
|
| Detection Method: | |
| Confidence: | 94.30103 |
| Match: | 2db3A |
| Description: | No description for 2db3A was found. |
|
Region A: Residues: [158-666] |
1 11 21 31 41 51
| | | | | |
1 SFYQMNLSRP LMRAIGVLGY IYPTPIQAST IPVALLGRDI CGCAATGTGK TAAYMLPTLE 60
61 RLLYRPLNNK AITRVLVLVP TRELGAQVYQ VTKQLCQFTT IDVGLAIGGL DVKAQEAVLR 120
121 QNPDIVIATP GRLIDHIKNT PSFTLDSIEV LILDEADRML DEYFAEQMKE IINSCCKTRQ 180
181 TMLFSATMSE QVKDLAAVSL DKPIKVFVNN NQQVAFNLRQ EFIRIREDKE GDREPILASL 240
241 ICRTFHDHCM VFVQTKKQAH RLHILLGLLG VRAGELHGNL TQQQRLESLK KFKEEQIDVL 300
301 IATDVAARGL DIVGVKTVIN FVMPITTEHY IHRVGRTARA GRAGISVSLA GEKERKIVKD 360
361 IIKNAESTIK NRIIPPEIIE KYRNKLTSLE PEIQNILDEE QAERQLAKTE QQLSKTERKL 420
421 LGQTNERRGW FQTKQQREAE KDRLALTTGD EDKASGGKGK GKTAGKRKRP EYGGDGEDGP 480
481 PVKDLEAKRN KKKKEEPRKK TPEQLAKER
|
| Detection Method: | |
| Confidence: | 50.30103 |
| Match: | 1oywA |
| Description: | Structure of the RecQ Catalytic Core |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| hydrogen ion transmembrane transporter activity | 9.07129841752891 | bayes_pls_golite062009 |
| hydrogen ion transporting ATP synthase activity, rotational mechanism | 8.58358908736821 | bayes_pls_golite062009 |
| translation initiation factor activity | 7.79457008386475 | bayes_pls_golite062009 |
| monovalent inorganic cation transmembrane transporter activity | 7.35625288284796 | bayes_pls_golite062009 |
| inorganic cation transmembrane transporter activity | 6.62734320850541 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 4.98637553020315 | bayes_pls_golite062009 |
| translation regulator activity | 4.94658029227343 | bayes_pls_golite062009 |
| 4.704140727858 | bayes_pls_golite062009 | |
| structural constituent of ribosome | 4.56509805974548 | bayes_pls_golite062009 |
| proton-transporting ATPase activity, rotational mechanism | 4.03326929098701 | bayes_pls_golite062009 |
| structural molecule activity | 3.58406348799895 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.4837867129694 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 3.35436118751376 | bayes_pls_golite062009 |
| hydrogen-exporting ATPase activity, phosphorylative mechanism | 3.28373827150339 | bayes_pls_golite062009 |
| transporter activity | 3.10463051760206 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 3.08390071341252 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.95886887664984 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 2.95079405147356 | bayes_pls_golite062009 |
| pyrophosphatase activity | 2.87427509025394 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 2.85499564954033 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 2.85178667290149 | bayes_pls_golite062009 |
| motor activity | 2.79327761685782 | bayes_pls_golite062009 |
| microtubule motor activity | 2.74365461017633 | bayes_pls_golite062009 |
| hydrolase activity | 2.65461298232951 | bayes_pls_golite062009 |
| binding | 2.64537357529343 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 2.61775212528604 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 2.61467977505707 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 2.57552435627908 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of substances | 2.57107347424517 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 2.57054427875021 | bayes_pls_golite062009 |
| nucleic acid binding | 2.51683451033161 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 2.50494515048649 | bayes_pls_golite062009 |
| ATPase activity, coupled | 2.43862163407966 | bayes_pls_golite062009 |
| ATPase activity | 2.39535714892224 | bayes_pls_golite062009 |
| cation-transporting ATPase activity | 2.31476707827367 | bayes_pls_golite062009 |
| RNA binding | 2.29590582680214 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 2.18118655708491 | bayes_pls_golite062009 |
| RNA cap binding | 2.17871969124431 | bayes_pls_golite062009 |
| DNA binding | 1.94055378599526 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.91091452720653 | bayes_pls_golite062009 |
| transcription regulator activity | 1.83584389083042 | bayes_pls_golite062009 |
| helicase activity | 1.70242731830224 | bayes_pls_golite062009 |
| protein-DNA loading ATPase activity | 1.54436515966471 | bayes_pls_golite062009 |
| DNA clamp loader activity | 1.51134988628578 | bayes_pls_golite062009 |
| RNA helicase activity | 1.42791449104435 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.40488517180956 | bayes_pls_golite062009 |
| RNA-dependent ATPase activity | 1.39335733374328 | bayes_pls_golite062009 |
| ATP-dependent RNA helicase activity | 1.36724390116598 | bayes_pls_golite062009 |
| voltage-gated cation channel activity | 1.3493704216639 | bayes_pls_golite062009 |
| protein transporter activity | 1.25342367751911 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of ions | 1.23799860254751 | bayes_pls_golite062009 |
| voltage-gated ion channel activity | 1.23468617030519 | bayes_pls_golite062009 |
| voltage-gated channel activity | 1.216998547662 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 1.2155186842031 | bayes_pls_golite062009 |
| potassium channel activity | 1.20877745413881 | bayes_pls_golite062009 |
| purine NTP-dependent helicase activity | 1.19311444180077 | bayes_pls_golite062009 |
| ATP-dependent helicase activity | 1.19311444180077 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| tubulin binding | 0.979946830272106 | bayes_pls_golite062009 |
| DNA-directed DNA polymerase activity | 0.971476020912368 | bayes_pls_golite062009 |
| transcription factor activity | 0.959949409533517 | bayes_pls_golite062009 |
| cation channel activity | 0.940476916156422 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.929901285538132 | bayes_pls_golite062009 |
| DNA polymerase activity | 0.928091843881235 | bayes_pls_golite062009 |
| nucleotide binding | 0.922442819194247 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.920987930180051 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.920926158369519 | bayes_pls_golite062009 |
| microtubule binding | 0.907162506177187 | bayes_pls_golite062009 |
| actin binding | 0.883285269827407 | bayes_pls_golite062009 |
| ion channel activity | 0.848261056209476 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 0.806331380134838 | bayes_pls_golite062009 |
| channel activity | 0.806331380134838 | bayes_pls_golite062009 |
| substrate-specific channel activity | 0.799997700906738 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.782430219754236 | bayes_pls_golite062009 |
| mRNA binding | 0.76699944561918 | bayes_pls_golite062009 |
| DNA helicase activity | 0.72881469450553 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 0.652333406433794 | bayes_pls_golite062009 |
| gated channel activity | 0.650050847753837 | bayes_pls_golite062009 |
| double-stranded DNA binding | 0.6071273686445 | bayes_pls_golite062009 |
| transcription repressor activity | 0.607045223341107 | bayes_pls_golite062009 |
| ATP-dependent DNA helicase activity | 0.5886142102548 | bayes_pls_golite062009 |
| GTPase activity | 0.437665353870877 | bayes_pls_golite062009 |
| anion transmembrane transporter activity | 0.43332053110728 | bayes_pls_golite062009 |
| snRNA binding | 0.418985924846052 | bayes_pls_golite062009 |
| ATP binding | 0.41092997612902 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 0.385813421701492 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 0.377870145186619 | bayes_pls_golite062009 |
| guanyl nucleotide binding | 0.296406132096546 | bayes_pls_golite062009 |
| GTP binding | 0.295705904888768 | bayes_pls_golite062009 |
| guanyl ribonucleotide binding | 0.29028316917561 | bayes_pls_golite062009 |
| molecular transducer activity | 0.286367085584159 | bayes_pls_golite062009 |
| signal transducer activity | 0.286367085584159 | bayes_pls_golite062009 |
| di-, tri-valent inorganic cation transmembrane transporter activity | 0.226231702119567 | bayes_pls_golite062009 |
| protein binding | 0.170837278876362 | bayes_pls_golite062009 |
| microfilament motor activity | 0.10236059675512 | bayes_pls_golite062009 |
| signal sequence binding | 6.53725193420218E-4 | bayes_pls_golite062009 |
|
Region A: Residues: [667-782] |
1 11 21 31 41 51
| | | | | |
1 AMKEIEKVSL VRAKMAKLRK RPGKLGAATE VHRSGASDGK PKRRGGQSAF TNDLTDVSRG 60
61 GALRLRSEAN RHKKMTKIAA KKKASSVKLT NKAGKNKFNK GKNFGGPRHA KKDKKK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
