| From Publication: | Gavin A.C. et al. (2002) Abstract Functional organization of the yeast proteome by systematic analysis of protein complexes. Nature. 2002 Jan 10;415(6868):141-7. |
| Notes: | From the published set of protein complexes. |
| Complex Size: | 13 proteins |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| ER to Golgi transport vesicle | 3.3431E-7 | 13 | 31 | 4 | 6292 |
| transport vesicle | 1.5578E-6 | 13 | 45 | 4 | 6292 |
| coated vesicle | 1.8391E-5 | 13 | 83 | 4 | 6292 |
| membrane-bounded vesicle | 5.0235E-5 | 13 | 107 | 4 | 6292 |
| cytoplasmic vesicle | 5.0235E-5 | 13 | 107 | 4 | 6292 |
| cytoplasmic membrane-bounded vesicle | 5.0235E-5 | 13 | 107 | 4 | 6292 |
| vesicle | 5.6004E-5 | 13 | 110 | 4 | 6292 |
| nuclear lumen | 1.4991E-3 | 13 | 453 | 5 | 6292 |
| replication fork protection complex | 4.1283E-3 | 13 | 2 | 1 | 6292 |
| 1,3-beta-glucan synthase complex | 6.1865E-3 | 13 | 3 | 1 | 6292 |
| organelle lumen | 7.8525E-3 | 13 | 660 | 5 | 6292 |
| intracellular organelle lumen | 7.8525E-3 | 13 | 660 | 5 | 6292 |
| nucleolus | 8.2902E-3 | 13 | 211 | 3 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| ER to Golgi vesicle-mediated transport | 1.8391E-5 | 13 | 83 | 4 | 6292 |
| Golgi vesicle transport | 2.9042E-4 | 13 | 168 | 4 | 6292 |
| vesicle-mediated transport | 4.0158E-4 | 13 | 340 | 5 | 6292 |
| rRNA processing | 2.0259E-3 | 13 | 128 | 3 | 6292 |
| histone H3-K79 methylation | 2.0661E-3 | 13 | 1 | 1 | 6292 |
| rRNA metabolic process | 2.4612E-3 | 13 | 137 | 3 | 6292 |
| intracellular transport | 3.6488E-3 | 13 | 553 | 5 | 6292 |
| histone lysine methylation | 4.1283E-3 | 13 | 2 | 1 | 6292 |
| ribosome biogenesis | 4.3223E-3 | 13 | 346 | 4 | 6292 |
| establishment of localization in cell | 5.1732E-3 | 13 | 599 | 5 | 6292 |
| ribonucleoprotein complex biogenesis | 5.7164E-3 | 13 | 374 | 4 | 6292 |
| cellular localization | 7.0235E-3 | 13 | 643 | 5 | 6292 |
| ribosomal large subunit biogenesis | 7.6171E-3 | 13 | 65 | 2 | 6292 |
| negative regulation of proteolysis | 8.2408E-3 | 13 | 4 | 1 | 6292 |
| 1,3-beta-glucan biosynthetic process | 8.2408E-3 | 13 | 4 | 1 | 6292 |
| 1,3-beta-glucan metabolic process | 8.2408E-3 | 13 | 4 | 1 | 6292 |
| ncRNA processing | 8.7308E-3 | 13 | 215 | 3 | 6292 |
| cellular component biogenesis | 9.7186E-3 | 13 | 694 | 5 | 6292 |
| transport | 9.8122E-3 | 13 | 997 | 6 | 6292 |
Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).
Only showing terms with a p-value less than or equal to 0.01.
| GO Term |
P-value |
A |
B |
I |
T |
| 3-dehydroquinate dehydratase activity | 2.0661E-3 | 13 | 1 | 1 | 6292 |
| 3-dehydroquinate synthase activity | 2.0661E-3 | 13 | 1 | 1 | 6292 |
| shikimate 5-dehydrogenase activity | 2.0661E-3 | 13 | 1 | 1 | 6292 |
| 3-phosphoshikimate 1-carboxyvinyltransferase activity | 2.0661E-3 | 13 | 1 | 1 | 6292 |
| shikimate kinase activity | 2.0661E-3 | 13 | 1 | 1 | 6292 |
| 1,3-beta-glucan synthase activity | 6.1865E-3 | 13 | 3 | 1 | 6292 |
| carbon-oxygen lyase activity, acting on phosphates | 6.1865E-3 | 13 | 3 | 1 | 6292 |