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View Protein Complex Details

Complex Overview

From Publication: Krogan N. J. et al. (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22.
Notes: From the published set of core protein complex predictions.
Complex Size: 7 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

organelle membrane 3.8647E-3 7 692 4 6292
membrane fraction 4.1444E-3 7 91 2 6292
insoluble fraction 4.1444E-3 7 91 2 6292
cell fraction 8.188E-3 7 129 2 6292
endoplasmic reticulum membrane 8.6871E-3 7 133 2 6292
proton-transporting V-type ATPase, V1 domain 8.8705E-3 7 8 1 6292
vacuolar proton-transporting V-type ATPase, V1 domain 8.8705E-3 7 8 1 6292
CCR4-NOT core complex 8.8705E-3 7 8 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

lipid biosynthetic process 8.3115E-3 7 130 2 6292
nuclear-transcribed mRNA poly(A) tail shortening 8.8705E-3 7 8 1 6292
electron transport 9.9746E-3 7 9 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

GTPase activity 1.8819E-3 7 61 2 6292
enoyl-[acyl-carrier-protein] reductase activity 2.224E-3 7 2 1 6292
nucleoside-triphosphatase activity 4.2356E-3 7 329 3 6292
hydrolase activity, acting on acid anhydrides 5.1735E-3 7 353 3 6292
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 5.1735E-3 7 353 3 6292
pyrophosphatase activity 5.1735E-3 7 353 3 6292
electron carrier activity 8.8705E-3 7 8 1 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle