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View Protein Complex Details

Complex Overview

From Publication: Krogan N. J. et al. (2006) Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Nature. 2006 Mar 30;440(7084):637-43. Epub 2006 Mar 22.
Notes: From the published set of core protein complex predictions.
Complex Size: 8 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

endoplasmic reticulum membrane 4.7848E-4 8 133 3 6292
cytoplasmic part 5.8228E-4 8 2482 8 6292
endoplasmic reticulum 6.4028E-4 8 364 4 6292
endoplasmic reticulum part 6.8116E-4 8 150 3 6292
subsynaptic reticulum 6.8116E-4 8 150 3 6292
membrane 9.2686E-4 8 1198 6 6292
nuclear membrane-endoplasmic reticulum network 2.4152E-3 8 232 3 6292
plasma membrane 3.6485E-3 8 268 3 6292
membrane part 6.0097E-3 8 662 4 6292
translocon complex 6.3431E-3 8 5 1 6292
Sec61 translocon complex 6.3431E-3 8 5 1 6292
organelle membrane 7.0609E-3 8 692 4 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

intracellular accumulation of glycerol 1.2715E-3 8 1 1 6292
cellular hyperosmotic response 1.2715E-3 8 1 1 6292
macromolecule glycosylation 3.7475E-3 8 75 2 6292
protein amino acid glycosylation 3.7475E-3 8 75 2 6292
glycosylation 3.7475E-3 8 75 2 6292
glycoprotein biosynthetic process 4.3588E-3 8 81 2 6292
glycoprotein metabolic process 4.5722E-3 8 83 2 6292
ion transport 9.3692E-3 8 120 2 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

primary active transmembrane transporter activity 2.0312E-3 8 55 2 6292
P-P-bond-hydrolysis-driven transmembrane transporter activity 2.0312E-3 8 55 2 6292
ATPase activity, coupled to transmembrane movement of substances 2.0312E-3 8 55 2 6292
hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances 2.0312E-3 8 55 2 6292
ATPase activity, coupled to movement of substances 2.3343E-3 8 59 2 6292
glycerol-3-phosphate dehydrogenase (NAD+) activity 2.5415E-3 8 2 1 6292
hydrogen-exporting ATPase activity, phosphorylative mechanism 2.5415E-3 8 2 1 6292
transferase activity, transferring hexosyl groups 4.2539E-3 8 80 2 6292
xenobiotic transporter activity 5.0773E-3 8 4 1 6292
xenobiotic-transporting ATPase activity 5.0773E-3 8 4 1 6292
transferase activity, transferring glycosyl groups 7.1004E-3 8 104 2 6292
dolichyl-phosphate-mannose-protein mannosyltransferase activity 8.8705E-3 8 7 1 6292
active transmembrane transporter activity 9.5206E-3 8 121 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle