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View Protein Complex Details

Complex Overview

From Publication: Riffle <i>et al</i>. (2010) (Unpublished Data)
Notes: Complex predicted from the combined set of Gavin (2002), Gavin (2006), Ho (2002) and Krogan (2006); at p-value cutoff of 1E-7
Complex Size: 2 proteins

Complex Member Proteins

Cellular Component Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

SCF ubiquitin ligase complex 2.779E-6 2 11 2 6292
cullin-RING ubiquitin ligase complex 4.5979E-6 2 14 2 6292
ubiquitin ligase complex 4.5626E-5 2 43 2 6292
RAVE complex 9.5344E-4 2 3 1 6292
CBF3 complex 1.2712E-3 2 4 1 6292
cellular bud neck contractile ring 5.7138E-3 2 18 1 6292
actomyosin contractile ring 5.7138E-3 2 18 1 6292
contractile ring 5.7138E-3 2 18 1 6292
nuclear ubiquitin ligase complex 7.2981E-3 2 23 1 6292
cell division site 8.5646E-3 2 27 1 6292
cell division site part 8.5646E-3 2 27 1 6292

Biological Process Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

SCF-dependent proteasomal ubiquitin-dependent protein catabolic process 1.0611E-6 2 7 2 6292
G1/S transition of mitotic cell cycle 6.1895E-5 2 50 2 6292
protein ubiquitination 1.051E-4 2 65 2 6292
proteasomal protein catabolic process 1.1854E-4 2 69 2 6292
proteasomal ubiquitin-dependent protein catabolic process 1.1854E-4 2 69 2 6292
protein modification by small protein conjugation 1.8468E-4 2 86 2 6292
interphase of mitotic cell cycle 2.3525E-4 2 97 2 6292
interphase 2.3525E-4 2 97 2 6292
protein modification by small protein conjugation or removal 3.2544E-4 2 114 2 6292
modification-dependent protein catabolic process 6.1087E-4 2 156 2 6292
ubiquitin-dependent protein catabolic process 6.1087E-4 2 156 2 6292
proteolysis involved in cellular protein catabolic process 6.3467E-4 2 159 2 6292
modification-dependent macromolecule catabolic process 6.7534E-4 2 164 2 6292
cellular protein catabolic process 7.3441E-4 2 171 2 6292
proteolysis 8.8816E-4 2 188 2 6292
protein catabolic process 8.9766E-4 2 189 2 6292
centromere complex assembly 9.5344E-4 2 3 1 6292
kinetochore assembly 9.5344E-4 2 3 1 6292
kinetochore organization 9.5344E-4 2 3 1 6292
mitotic cell cycle 1.6363E-3 2 255 2 6292
cellular macromolecule catabolic process 1.7674E-3 2 265 2 6292
macromolecule catabolic process 2.1762E-3 2 294 2 6292
protein neddylation 2.224E-3 2 7 1 6292
cell cycle arrest in response to pheromone 2.5415E-3 2 8 1 6292
post-translational protein modification 3.2108E-3 2 357 2 6292
protein ubiquitination during ubiquitin-dependent protein catabolic process 3.4937E-3 2 11 1 6292
regulation of protein complex assembly 3.4937E-3 2 11 1 6292
cell cycle arrest 3.4937E-3 2 11 1 6292
cell cycle phase 3.5621E-3 2 376 2 6292
cellular catabolic process 4.3405E-3 2 415 2 6292
regulation of cellular component biogenesis 5.7138E-3 2 18 1 6292
cell cycle process 6.0534E-3 2 490 2 6292
catabolic process 6.2027E-3 2 496 2 6292
protein modification process 6.278E-3 2 499 2 6292
cell cycle 6.95E-3 2 525 2 6292
pH reduction 7.6148E-3 2 24 1 6292
intracellular pH reduction 7.6148E-3 2 24 1 6292
vacuolar acidification 7.6148E-3 2 24 1 6292
regulation of exit from mitosis 7.9314E-3 2 25 1 6292
regulation of cellular pH 7.9314E-3 2 25 1 6292
exit from mitosis 7.9314E-3 2 25 1 6292
regulation of intracellular pH 7.9314E-3 2 25 1 6292
macromolecule modification 8.1649E-3 2 569 2 6292
regulation of pH 9.1975E-3 2 29 1 6292
G2/M transition of mitotic cell cycle 9.1975E-3 2 29 1 6292

Molecular Function Analysis

Given the number of proteins in the complex (A), total proteins annotated with a given GO term (B), and the total number of annotated proteins (T); the p-value represents the chances of randomly having the number of proteins in the complex annotated with a specific GO term (I).

Only showing terms with a p-value less than or equal to 0.01.

GO Term

P-value

A

B

I

T

ubiquitin-protein ligase activity 8.0641E-5 2 57 2 6292
small conjugating protein ligase activity 9.5546E-5 2 62 2 6292
acid-amino acid ligase activity 1.2556E-4 2 71 2 6292
ligase activity, forming carbon-nitrogen bonds 2.2085E-4 2 94 2 6292
ligase activity 5.6464E-4 2 150 2 6292
DNA replication origin binding 4.1283E-3 2 13 1 6292
protein binding 9.4468E-3 2 612 2 6292

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle